RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KIAA1456Q9P272 454 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 WNK1Q9H4A3 2382 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 ARFGEF3Q5TH69 2177 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 PPT1P50897 306 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 CCDC144NLQ6NUI1 221 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 TBC1D26Q86UD7 250 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 TMEM252Q8N6L7 170 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 RPUSD1Q9UJJ7 312 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 CHD3Q12873 2000 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 KIR2DS1A0A191URI9 304 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 TFF1P04155 84 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 CD55P08174 381 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 CXCL1P09341 107 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 SCTP09683 121 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 FUT3P21217 361 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 PHLDA2Q53GA4 152 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 LGI3Q8N145 548 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR2C3Q8N628 320 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 SSMEM1Q8WWF3 244 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF251Q9BRH9 671 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 PARD6GQ9BYG4 376 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 PKIBQ9C010 78 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 TRAV39A0A0B4J263 110 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 TRAV24A0A0B4J272 114 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 ST8SIA3O43173 380 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 TXNL1O43396 289 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 CCL3L1P16619 93 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 HOXA5P20719 270 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 CLINT1Q14677 625 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 Q6P435 159 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 ACP7Q6ZNF0 438 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR10V1Q8NGI7 309 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 RCC1LQ96I51 464 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 S1PR3Q99500 378 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 GFOD1Q9NXC2 390 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 INSIG2Q9Y5U4 225 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 ASH1LQ9NR48 2969 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGHV3-43A0A0B4J1X8 118 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM24AA6NFZ4 105 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 SRRM5B3KS81 715 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGHV3-43DP0DP04 118 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 RND2P52198 227 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 BRWD1-AS2P59051 145 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 RUSC1-AS1Q66K80 236 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 LYG1Q8N1E2 194 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 Q8N7P7 452 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 C5orf30Q96GV9 206 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 NPFFR1Q9GZQ6 430 aa6.06□□□□□ -1.44
CDC42BPA-208ENST00000442054 H0Y980 276 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 CNIH1O95406 144 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 S100A8P05109 93 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 LOXP28300 417 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 ERVK11-1P61568 191 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 HERV-K104P61576 105 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 ARL16Q0P5N6 197 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF585BQ52M93 769 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM76BQ5HYJ3 339 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 CDPF1Q6NVV7 123 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 FOXRED2Q8IWF2 684 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 H1FOOQ8IZA3 346 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR4F5Q8NH21 305 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 Q8WTZ3 238 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 TOLLIPQ9H0E2 274 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGHV2-70DA0A0C4DH43 119 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 UMAD1C9J7I0 102 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 PGLYRP1O75594 196 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 GZMHP20718 246 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 FOXL1Q12952 345 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 DPPA3Q6W0C5 159 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 SLC16A13Q7RTY0 426 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 VMO1Q7Z5L0 202 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 WDR86Q86TI4 376 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 GPHA2Q96T91 129 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 HINT2Q9BX68 163 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR51M1Q9H341 326 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF286AQ9HBT8 521 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 RBFOX3A6NFN3 312 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 PMS2P5A8MQ11 134 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 NDUFS6O75380 124 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 SCAF4O95104 1147 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 IFNA21P01568 189 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 HSPB1P04792 205 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 PF4V1P10720 104 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 EGR1P18146 543 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR3A1P47881 315 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF124Q15973 351 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 ABHD12Q8N2K0 398 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 MBD3L1Q8WWY6 194 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 SSX3Q99909 188 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 CLEC7AQ9BXN2 247 aa6.05□□□□□ -1.44
CDC42BPA-208ENST00000442054 KIAA2026Q5HYC2 2103 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 PTBP3O95758 552 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 TSPAN15O95858 294 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGKV1-5P01602 117 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 PF4P02776 101 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 SSTP61278 116 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 LMO4P61968 165 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 BAXQ07812 192 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 KLRD1Q13241 179 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms