RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SRYQ05066 204 aa9.95□□□□□ -0.82
LTBR-203ENST00000441074 OR1C1Q15619 314 aa9.95□□□□□ -0.82
LTBR-203ENST00000441074 APOBEC3DQ96AK3 386 aaPredicted RBP9.95□□□□□ -0.82
LTBR-203ENST00000441074 FAM103A1Q9BTL3 118 aaKnown RBP9.95□□□□□ -0.82
LTBR-203ENST00000441074 LINC00470Q9BZP3 86 aa9.95□□□□□ -0.82
LTBR-203ENST00000441074 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
LTBR-203ENST00000441074 MSRB2Q9Y3D2 182 aa9.95□□□□□ -0.82
LTBR-203ENST00000441074 MAP1BP46821 2468 aaKnown RBP9.94□□□□□ -0.82
LTBR-203ENST00000441074 LRRC30A6NM36 301 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 SYNGR1O43759 233 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 WDR1O75083 606 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 ZNF253O75346 499 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 BMP5P22003 454 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 HLA-DRB5Q30154 266 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 KRTCAP3Q53RY4 240 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 MRPL21Q7Z2W9 205 aaKnown RBP9.94□□□□□ -0.82
LTBR-203ENST00000441074 DRAM1Q8N682 238 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 OR2D3Q8NGH3 330 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 GNB1LQ9BYB4 327 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 GNB4Q9HAV0 340 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
LTBR-203ENST00000441074 CRIM1Q9NZV1 1036 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
LTBR-203ENST00000441074 A0A1W2PPV4 95 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 WISP2O76076 250 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 REG1AP05451 166 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 MAGEA5P43359 124 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 IER3P46695 156 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 THBS3P49746 956 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 MORN2Q502X0 79 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 MOB1BQ7L9L4 216 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 KLHDC1Q8N7A1 406 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 Q8N7P7 452 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 CPEB3Q8NE35 698 aaKnown RBP9.94□□□□□ -0.82
LTBR-203ENST00000441074 COX11Q9Y6N1 276 aa9.94□□□□□ -0.82
LTBR-203ENST00000441074 PIEZO2Q9H5I5 2752 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 DOCK11Q5JSL3 2073 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 RELNP78509 3460 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 TRAV38-1A0A0B4J264 116 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 AQP7O14520 342 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 SH2D1BO14796 132 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 C3AR1Q16581 482 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 OR10J3Q5JRS4 329 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 ZNF738Q8NE65 137 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 APH1AQ96BI3 265 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 MRPS16Q9Y3D3 137 aaKnown RBP9.93□□□□□ -0.82
LTBR-203ENST00000441074 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 IGF2RP11717 2491 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 APC2O95996 2303 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 ACACAQ13085 2346 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 IGKV3D-15A0A087WSY6 115 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 SNURFLB1AK76 121 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 ZG16O60844 167 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 LYG1Q8N1E2 194 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 TCTEX1D1Q8N7M0 179 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 ALKBH7Q9BT30 221 aaPredicted RBP9.93□□□□□ -0.82
LTBR-203ENST00000441074 SFXN3Q9BWM7 321 aa9.93□□□□□ -0.82
LTBR-203ENST00000441074 GSX1Q9H4S2 264 aaPredicted RBP9.93□□□□□ -0.82
LTBR-203ENST00000441074 SCO2A0A1W2PP80 73 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 ODAMA1E959 279 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 A8MXE2 369 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 SLC17A3O00476 420 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 HNF1AP20823 631 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 G6PCP35575 357 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 AMTP48728 403 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 CCL11P51671 97 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 PRRX1P54821 245 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 GCSAMLQ5JQS6 135 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 OR2M7Q8NG81 312 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 ABHD3Q8WU67 409 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 KCNS1Q96KK3 526 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 ZNF488Q96MN9 340 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 BET1LQ9NYM9 111 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 WDR83OSQ9Y284 106 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 LY96Q9Y6Y9 160 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 TNRC6AQ8NDV7 1962 aaKnown RBP9.92□□□□□ -0.82
LTBR-203ENST00000441074 ANKRD11Q6UB99 2663 aaPredicted RBP9.92□□□□□ -0.82
LTBR-203ENST00000441074 NCKAP5O14513 1909 aa9.92□□□□□ -0.82
LTBR-203ENST00000441074 LOC105371242A0A075B767 164 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 A0A1W2PN81 502 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 A0A1W2PS18 150 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 MRPL33O75394 65 aaKnown RBP9.91□□□□□ -0.82
LTBR-203ENST00000441074 IGHV3-9P01782 118 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 MT-ND6P03923 174 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 RPS16P62249 146 aaKnown RBP9.91□□□□□ -0.82
LTBR-203ENST00000441074 PSG7Q13046 419 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 DPRXA6NFQ7 191 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 OR5B21A6NL26 309 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 K7EN84 100 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 SS18L1O75177 396 aaPredicted RBP9.91□□□□□ -0.82
LTBR-203ENST00000441074 TSPOP30536 169 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 CEACAM8P31997 349 aaPredicted RBP9.91□□□□□ -0.82
LTBR-203ENST00000441074 RPL19P84098 196 aaKnown RBP9.91□□□□□ -0.82
LTBR-203ENST00000441074 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 IGF2-ASQ6U949 168 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 MMD2Q8IY49 270 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 ZBTB34Q8NCN2 500 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms