RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PPIAL4DF5H284 164 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TMEM178BH3BS89 294 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 FCGR3BO75015 233 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 HRASP01112 189 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TFF1P04155 84 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 HSPB1P04792 205 aaKnown RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 SAA2P0DJI9 122 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 PPIAL4FP0DN26 164 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 PPT1P50897 306 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 AKR1C1Q04828 323 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 RHEBQ15382 184 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 GUCA2BQ16661 112 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 RTL8BQ17RB0 113 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 LRRC10Q5BKY1 277 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 SLC25A48Q6ZT89 311 aaKnown RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TCF23Q7RTU1 214 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 CENPVQ7Z7K6 275 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 FAM216BQ8N7L0 139 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 OR10P1Q8NGE3 313 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 OR4A16Q8NH70 328 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 RFESDQ8TAC1 157 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TMEM158Q8WZ71 300 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TAF15Q92804 592 aaKnown RBP eCLIP7.52□□□□□ -1.215e-10■□□□□ 10.5
HDAC6-209ENST00000440653 ZNF714Q96N38 554 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 EIF5A2Q9GZV4 153 aaKnown RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TMEM231Q9H6L2 316 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 TMEM106BQ9NUM4 274 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 KAAG1Q9UBP8 84 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 FOXA2Q9Y261 457 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 FAM96BQ9Y3D0 163 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 FBXO7Q9Y3I1 522 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 PPIAL4AQ9Y536 164 aa7.52□□□□□ -1.21
HDAC6-209ENST00000440653 SONP18583 2426 aaKnown RBP7.52□□□□□ -1.21
HDAC6-209ENST00000440653 CADP27708 2225 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 C15orf61A6NNL5 157 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 DNASE2O00115 360 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-209ENST00000440653 TSPAN4O14817 238 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 AGPAT2O15120 278 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 TMPRSS2O15393 492 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 APOA2P02652 100 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 GYPAP02724 150 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 APOBEC3AP31941 199 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-209ENST00000440653 PPOXP50336 477 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 ATP5IP56385 69 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-209ENST00000440653 BRWD1-AS2P59051 145 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 MRPS11P82912 194 aaKnown RBP7.51□□□□□ -1.21
HDAC6-209ENST00000440653 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
HDAC6-209ENST00000440653 RUNX1Q01196 453 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 PMS2P11Q13670 270 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 LTC4SQ16873 150 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 IZUMO4Q1ZYL8 232 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 KHDC3LQ587J8 217 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 SPRNQ5BIV9 151 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 ZNF506Q5JVG8 444 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 HEPN1Q6WQI6 88 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 THNSL2Q86YJ6 484 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 DMRTC2Q8IXT2 367 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-209ENST00000440653 OR4C12Q96R67 309 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 CCL13Q99616 98 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 TMEM140Q9NV12 185 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 PRNDQ9UKY0 176 aa7.51□□□□□ -1.21
HDAC6-209ENST00000440653 RBFOX3A6NFN3 312 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 DEFB108AA8MXU0 73 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 FNDC10F2Z333 226 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 H7C2Y5 167 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 SMAD7O15105 426 aaKnown RBP7.5□□□□□ -1.21
HDAC6-209ENST00000440653 NDUFB3O43676 98 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 CRLF1O75462 422 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 RBP4P02753 201 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 SELLP14151 372 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 NDUFB7P17568 137 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 IL3RAP26951 378 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 HOXA1P49639 335 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-209ENST00000440653 FHITP49789 147 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 OR2B8PP59922 312 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 RAB11AP62491 216 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 GNB2P62879 340 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 RPL31P62899 125 aaKnown RBP7.5□□□□□ -1.21
HDAC6-209ENST00000440653 CCL8P80075 99 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 DLK1P80370 383 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 HOXA4Q00056 320 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-209ENST00000440653 ATRAIDQ6UW56 229 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 C22orf34Q6ZV56 151 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 HAPLN4Q86UW8 402 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 LINC00311Q8N616 119 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 ZNF709Q8N972 641 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 CA5BP1Q8WTZ4 195 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 MBD3L1Q8WWY6 194 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 MBD6Q96DN6 1003 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 PLPPR2Q96GM1 343 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 WFIKKN1Q96NZ8 548 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 P2RX4Q99571 388 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 SCRT1Q9BWW7 348 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 SMCO4Q9NRQ5 59 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 ZNF257Q9Y2Q1 563 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
HDAC6-209ENST00000440653 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms