RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 FKBP14Q9NWM8 211 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 MRPL27Q9P0M9 148 aaKnown RBP15.26■□□□□ 0.03
TRIM39-210ENST00000440271 KLK9Q9UKQ9 250 aa15.26■□□□□ 0.03
TRIM39-210ENST00000440271 VPS13DQ5THJ4 4388 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 A0A1B0GW64 132 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 DHFRP00374 187 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 GNAO1P09471 354 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 ZNF735P0CB33 412 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 AREGP15514 252 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 PSMB6P28072 239 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 TMEM203Q969S6 136 aa15.25■□□□□ 0.03
TRIM39-210ENST00000440271 SPAG8Q99932 426 aaPredicted RBP15.25■□□□□ 0.03
TRIM39-210ENST00000440271 TRBV7-1A0A0A6YYK4 115 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 J3QRK9 145 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 GALP22466 123 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 SPHARQ15513 63 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 OR2B11Q5JQS5 317 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 TMEM91Q6ZNR0 172 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 C8orf59Q8N0T1 100 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-210ENST00000440271 TMEM167AQ8TBQ9 72 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 OR2A7Q96R45 310 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 C5orf66Q9H5L9 145 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 PRELID3BQ9Y3B1 194 aa15.24■□□□□ 0.03
TRIM39-210ENST00000440271 TMEM272A0A1B0GTI8 110 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 KBTBD11O94819 623 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 HIST1H1BP16401 226 aaKnown RBP15.23■□□□□ 0.03
TRIM39-210ENST00000440271 GNB3P16520 340 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 CTRB1P17538 263 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 MAS1LP35410 378 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 ELLP55199 621 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-210ENST00000440271 RPL30P62888 115 aaKnown RBP15.23■□□□□ 0.03
TRIM39-210ENST00000440271 PRR20EP86478 221 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 PRR20CP86479 221 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 PRR20DP86480 221 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 PRR20BP86481 221 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 PRR20AP86496 221 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 ARFRP1Q13795 201 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 CTRB2Q6GPI1 263 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 KCTD9Q7L273 389 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 ZNF645Q8N7E2 425 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 VSTM2AQ8TAG5 236 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 FBLIM1Q8WUP2 373 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 CENPOQ9BU64 300 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 RAB22AQ9UL26 194 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 MRPS7Q9Y2R9 242 aaKnown RBP15.23■□□□□ 0.03
TRIM39-210ENST00000440271 LSM2Q9Y333 95 aaKnown RBP15.23■□□□□ 0.03
TRIM39-210ENST00000440271 UFC1Q9Y3C8 167 aa15.23■□□□□ 0.03
TRIM39-210ENST00000440271 IGKV1D-8A0A087WSZ0 117 aa15.22■□□□□ 0.03
TRIM39-210ENST00000440271 MFSD2BA6NFX1 497 aa15.22■□□□□ 0.03
TRIM39-210ENST00000440271 RPL35AP18077 110 aaKnown RBP15.22■□□□□ 0.03
TRIM39-210ENST00000440271 LIPKQ5VXJ0 399 aa15.22■□□□□ 0.03
TRIM39-210ENST00000440271 PUSL1Q8N0Z8 303 aaKnown RBP15.22■□□□□ 0.03
TRIM39-210ENST00000440271 OR10R2Q8NGX6 335 aa15.22■□□□□ 0.03
TRIM39-210ENST00000440271 CXorf58Q96LI9 332 aa15.22■□□□□ 0.03
TRIM39-210ENST00000440271 IGLV11-55A0A075B6I3 123 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 A0A075B6Q4 140 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 IGHV3-35A0A0C4DH35 117 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 MFNGO00587 321 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 TSPAN4O14817 238 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 DEFA4P12838 97 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 PSMD7P51665 324 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 MED22Q15528 200 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 ODF3L2Q3SX64 289 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 Q6ZS49 121 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 PACRGLQ8N7B6 248 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 MAP6D1Q9H9H5 199 aa15.21■□□□□ 0.03
TRIM39-210ENST00000440271 RBMX2Q9Y388 322 aaKnown RBP15.21■□□□□ 0.03
TRIM39-210ENST00000440271 ARL6IP5O75915 188 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 REG1AP05451 166 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 MYOD1P15172 320 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 GPR183P32249 361 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 RANBP1P43487 201 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 PLET1Q6UQ28 207 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 UFD1Q92890 307 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 C8orf4Q9NR00 106 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 V9GY05 133 aa15.2■□□□□ 0.02
TRIM39-210ENST00000440271 RAB27BO00194 218 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 S1PR2O95136 353 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 IGLV2-14P01704 120 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 HIST1H1DP16402 221 aaKnown RBP15.19■□□□□ 0.02
TRIM39-210ENST00000440271 CD36P16671 472 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 CRHBPP24387 322 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 GADD45AP24522 165 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 FCGR2BP31994 310 aaPredicted RBP15.19■□□□□ 0.02
TRIM39-210ENST00000440271 TALDO1P37837 337 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 NANOS2P60321 138 aaKnown RBP15.19■□□□□ 0.02
TRIM39-210ENST00000440271 RPS25P62851 125 aaKnown RBP15.19■□□□□ 0.02
TRIM39-210ENST00000440271 HES5Q5TA89 166 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 OR4S2Q8NH73 311 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 ZNF502Q8TBZ5 544 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 GALNT14Q96FL9 552 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 ZNF436Q9C0F3 470 aaPredicted RBP15.19■□□□□ 0.02
TRIM39-210ENST00000440271 OR2W1Q9Y3N9 320 aa15.19■□□□□ 0.02
TRIM39-210ENST00000440271 PTGES3LE9PB15 166 aa15.18■□□□□ 0.02
TRIM39-210ENST00000440271 HLA-DQB1P01920 261 aa15.18■□□□□ 0.02
TRIM39-210ENST00000440271 IFNA4P05014 189 aa15.18■□□□□ 0.02
TRIM39-210ENST00000440271 BRWD1-AS2P59051 145 aa15.18■□□□□ 0.02
TRIM39-210ENST00000440271 LAMTOR1Q6IAA8 161 aa15.18■□□□□ 0.02
TRIM39-210ENST00000440271 C11orf45Q8TAV5 145 aa15.18■□□□□ 0.02
TRIM39-210ENST00000440271 ERICH4A6NGS2 130 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms