RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 IGSF23A1L1A6 192 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 APOA2P02652 100 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 P0C879 139 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 IGHV1-8P0DP01 117 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 IAPPP10997 89 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 NQO2P16083 231 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ARHGDIBP52566 201 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 DLX6P56179 175 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 UTF1Q5T230 341 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FAM71F2Q6NXP2 309 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 COMMD7Q86VX2 200 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PRIMA1Q86XR5 153 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 OR9G1Q8NH87 305 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LRRC20Q8TCA0 184 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SIRPDQ9H106 197 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SLC35D1Q9NTN3 355 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PSENENQ9NZ42 101 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TRAV40A0A0B4J280 105 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PROP1O75360 226 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TOX4O94842 621 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CRYZL1O95825 349 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LIPFP07098 398 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 BRWD1-AS2P59051 145 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LINC00205P59089 165 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TAS2R30P59541 319 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 MIDNQ504T8 468 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FAM74A1Q5RGS3 127 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 DHRS7BQ6IAN0 325 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ZNF833PQ6ZTB9 187 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LINC00311Q8N616 119 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 Q8N7P7 452 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 DDB2Q92466 427 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ZNF251Q9BRH9 671 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TMEM133Q9H2Q1 129 aa11.79□□□□□ -0.52
TNFRSF1A-204ENST00000440083 J3QR06 171 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 HRASP01112 189 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RBP4P02753 201 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 NMBP08949 121 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RRASP10301 218 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ERVFRD-1P60508 538 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 UBE2KP61086 200 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SRSF2Q01130 221 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TAGLNQ01995 201 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 NHLH2Q02577 135 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TNFRSF9Q07011 255 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 KLRD1Q13241 179 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ZNF266Q14584 549 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SSX9Q7RTT3 188 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 VMO1Q7Z5L0 202 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 BCL6BQ8N143 479 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 NANPQ8TBE9 248 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CITED4Q96RK1 184 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RBKSQ9H477 322 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SIRT7Q9NRC8 400 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CACFD1Q9UGQ2 172 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CUBNO60494 3623 aa11.78□□□□□ -0.52
TNFRSF1A-204ENST00000440083 A0A087X0M5 115 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 A0A1B0GX30 115 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CEBPZOSA8MTT3 80 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 H3BP45 60 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TXNL1O43396 289 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SULT1A1P50225 295 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 PRRX1P54821 245 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TMEM267Q0VDI3 215 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CLINT1Q14677 625 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 BRD3OSQ6XYD6 125 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ZNF596Q8TC21 504 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 RNF141Q8WVD5 230 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TNFRSF14Q92956 283 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 LHX4Q969G2 390 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 AIFM2Q9BRQ8 373 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 MRPL20Q9BYC9 149 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ZNRD1Q9P1U0 126 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 NUP50Q9UKX7 468 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 KPTNQ9Y664 436 aa11.77□□□□□ -0.53
TNFRSF1A-204ENST00000440083 DFFBO76075 338 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CST7O76096 145 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 LY86O95711 162 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TMEM50AO95807 157 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 IFNA17P01571 189 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms