RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SSX9Q7RTT3 188 aa18.29■□□□□ 0.52
VARS-217ENST00000440048 DPF1Q92782 380 aa18.29■□□□□ 0.52
VARS-217ENST00000440048 SCOCQ9UIL1 159 aa18.29■□□□□ 0.52
VARS-217ENST00000440048 PGLYRP1O75594 196 aaPredicted RBP18.28■□□□□ 0.52
VARS-217ENST00000440048 KRTAP10-11P60412 298 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 EGFEM1PQ0D2K5 195 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 C15orf40Q8WUR7 153 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 SPIN2AQ99865 258 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 SPIN2BQ9BPZ2 258 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 COA4Q9NYJ1 87 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 MTFP1Q9UDX5 166 aa18.28■□□□□ 0.52
VARS-217ENST00000440048 M0QYG6 137 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 GPR31O00270 319 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 MPPED1O15442 326 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 BRI3O95415 125 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 HPRT1P00492 218 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 RLN1P04808 185 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 OR9G9P0C7N8 305 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 VAX1Q5SQQ9 334 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 CMTM1Q8IZ96 169 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 ADAD2Q8NCV1 583 aaKnown RBP18.27■□□□□ 0.52
VARS-217ENST00000440048 CD300LFQ8TDQ1 290 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 AIFM2Q9BRQ8 373 aa18.27■□□□□ 0.52
VARS-217ENST00000440048 TINAGL1Q9GZM7 467 aaPredicted RBP18.27■□□□□ 0.52
VARS-217ENST00000440048 IGHV4OR15-8A0A075B7B6 117 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 A0A087WW49 117 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 LINC01619G3V211 115 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 MAS1LP35410 378 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 TAS2R31P59538 309 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 OR4A47Q6IF82 309 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 FCAMRQ8WWV6 532 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 PLEKHA2Q9HB19 425 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 BET1LQ9NYM9 111 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 CEPT1Q9Y6K0 416 aa18.26■□□□□ 0.51
VARS-217ENST00000440048 C13orf42A0A1B0GVH6 325 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 S1PR2O95136 353 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 HSPB1P04792 205 aaKnown RBP18.25■□□□□ 0.51
VARS-217ENST00000440048 NQO2P16083 231 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 RPL27AP46776 148 aaKnown RBP18.25■□□□□ 0.51
VARS-217ENST00000440048 SLURP1P55000 103 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 DGCR2P98153 550 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 POU2AF1Q16633 256 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 OR4A5Q8NH83 315 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 DCUN1D4Q92564 292 aa18.25■□□□□ 0.51
VARS-217ENST00000440048 A0A0G2JLM5 398 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 SEC14L6B5MCN3 397 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 TEX22C9J3V5 150 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 E7EUB6 86 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 CD3DP04234 171 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 IL6RP08887 468 aaPredicted RBP18.24■□□□□ 0.51
VARS-217ENST00000440048 F2RP25116 425 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 RPL8P62917 257 aaKnown RBP18.24■□□□□ 0.51
VARS-217ENST00000440048 DEFA5Q01523 94 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 PHLDA2Q53GA4 152 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 RNASE10Q5GAN6 216 aaKnown RBP18.24■□□□□ 0.51
VARS-217ENST00000440048 C9orf66Q5T8R8 295 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 LPCAT3Q6P1A2 487 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 MRAPQ8TCY5 172 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 DGCR14Q96DF8 476 aaKnown RBP18.24■□□□□ 0.51
VARS-217ENST00000440048 RSRP1Q9BUV0 290 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 SLIRPQ9GZT3 109 aaKnown RBP18.24■□□□□ 0.51
VARS-217ENST00000440048 HRASLSQ9HDD0 168 aa18.24■□□□□ 0.51
VARS-217ENST00000440048 A0A1B0GW64 132 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 HMX3A6NHT5 357 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 GABARAPH6UMI1 98 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 RBMXL2O75526 392 aaKnown RBP18.23■□□□□ 0.51
VARS-217ENST00000440048 IFNA6P05013 189 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 MYOD1P15172 320 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 HLA-GP17693 338 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 UCP3P55916 312 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 TTC9CQ8N5M4 171 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 DLX4Q92988 240 aaPredicted RBP18.23■□□□□ 0.51
VARS-217ENST00000440048 DIRAS2Q96HU8 199 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 FYTTD1Q96QD9 318 aaKnown RBP18.23■□□□□ 0.51
VARS-217ENST00000440048 C6orf62Q9GZU0 229 aaPredicted RBP18.23■□□□□ 0.51
VARS-217ENST00000440048 COMMD9Q9P000 198 aa18.23■□□□□ 0.51
VARS-217ENST00000440048 TRAV3A0A0B4J244 114 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 OVOL1O14753 267 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 PRH1P02810 166 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 ZNF735P0CB33 412 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 TBPP20226 339 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 LPAR6P43657 344 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 MRPS10P82664 201 aaKnown RBP18.22■□□□□ 0.51
VARS-217ENST00000440048 SLC38A6Q8IZM9 456 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 TMEM229BQ8NBD8 167 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 DMBX1Q8NFW5 382 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 TMEM140Q9NV12 185 aa18.22■□□□□ 0.51
VARS-217ENST00000440048 UPK2O00526 184 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 RPA2P15927 270 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 S100GP29377 79 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 ZNF45Q02386 682 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 ZNF585BQ52M93 769 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 SLC25A42Q86VD7 318 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 LHFPL1Q86WI0 220 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 ARRDC1Q8N5I2 433 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 USMG5Q96IX5 58 aa18.21■□□□□ 0.51
VARS-217ENST00000440048 WI2-2373I1.2A0A1W2PRP0 233 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 ANKRD34BA5PLL1 514 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 K7EIL1 84 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 CD74P04233 296 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms