RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 OR10P1Q8NGE3 313 aa12.27□□□□□ -0.44
CPSF7-205ENST00000439958 FAM96BQ9Y3D0 163 aa12.27□□□□□ -0.44
CPSF7-205ENST00000439958 IGHV3OR16-10A0A075B7F0 116 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 AKR1C8PQ5T2L2 129 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 UBAC2Q8NBM4 344 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 NCOR1P1Q9H4R4 102 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 PATZ1Q9HBE1 687 aaKnown RBP12.27□□□□□ -0.45
CPSF7-205ENST00000439958 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-205ENST00000439958 HMGB3O15347 200 aaKnown RBP12.27□□□□□ -0.45
CPSF7-205ENST00000439958 SAA1P0DJI8 122 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-205ENST00000439958 KIR2DS2P43631 304 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 SSX2Q16385 188 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 COMMD5Q9GZQ3 224 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
CPSF7-205ENST00000439958 TSPAN15O95858 294 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 APOC3P02656 99 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 TCTEX1D1Q8N7M0 179 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 OR4C12Q96R67 309 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 TSNAXQ99598 290 aaKnown RBP12.26□□□□□ -0.45
CPSF7-205ENST00000439958 ATP5SQ99766 215 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 OR51B2Q9Y5P1 312 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 SLC25A6P12236 298 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 MIDNQ504T8 468 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 ZNF295-AS1Q8N0V1 137 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 MMP26Q9NRE1 261 aa12.26□□□□□ -0.45
CPSF7-205ENST00000439958 SNCAP37840 140 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 LGALS4P56470 323 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 DEFA5Q01523 94 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-205ENST00000439958 MS4A7Q9GZW8 240 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-205ENST00000439958 SONP18583 2426 aaKnown RBP12.25□□□□□ -0.45
CPSF7-205ENST00000439958 DFFBO76075 338 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 IGHV3-48P01763 117 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 GAPDHP04406 335 aaKnown RBP12.25□□□□□ -0.45
CPSF7-205ENST00000439958 COX6B1P14854 86 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 VPS13CQ709C8 3753 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 LRRC20Q8TCA0 184 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 TMEM186Q96B77 213 aa12.25□□□□□ -0.45
CPSF7-205ENST00000439958 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
CPSF7-205ENST00000439958 H0YJW9 148 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 IGHV4-39P01824 125 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 ZFP36P26651 326 aaKnown RBP12.24□□□□□ -0.45
CPSF7-205ENST00000439958 F2RL1P55085 397 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 ETV3LQ6ZN32 361 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 OR10W1Q8NGF6 305 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 DDB2Q92466 427 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-205ENST00000439958 PLEKHA3Q9HB20 300 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 RELBQ01201 579 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 PJVKQ0ZLH3 352 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 LHFPL4Q7Z7J7 247 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 SFT2D1Q8WV19 159 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 PINX1Q96BK5 328 aaKnown RBP12.24□□□□□ -0.45
CPSF7-205ENST00000439958 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 LINC00052Q96N35 136 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
CPSF7-205ENST00000439958 FAM157AC9JC47 383 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 REG1AP05451 166 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 MARC2Q969Z3 335 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 RITA1Q96K30 269 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 WASHC3Q9Y3C0 194 aa12.24□□□□□ -0.45
CPSF7-205ENST00000439958 RRHO14718 337 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 CNTFRP26992 372 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 HAPLN4Q86UW8 402 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 NABP2Q9BQ15 211 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.454e-7■□□□□ 10.3
CPSF7-205ENST00000439958 FGF7P21781 194 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 SPCS3P61009 180 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 HLA-DRB5Q30154 266 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 LCN15Q6UWW0 184 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 OR4C13Q8NGP0 309 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 COA4Q9NYJ1 87 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 FAM90A26D6RGX4 464 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 DEFA4P12838 97 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 MMP9P14780 707 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 DLX6P56179 175 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 TMEM30BQ3MIR4 351 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 ZNF833PQ6ZTB9 187 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 ABHD5Q8WTS1 349 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 FAM168AQ92567 244 aa12.23□□□□□ -0.45
CPSF7-205ENST00000439958 OR10A7Q8NGE5 316 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 CLDND2Q8NHS1 167 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 UQCC1Q9NVA1 299 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 ITGB1BP1O14713 200 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 FAM157CP0CG43 387 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 HTR1DP28221 377 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 SRSF3P84103 164 aaKnown RBP12.22□□□□□ -0.45
CPSF7-205ENST00000439958 TLE4Q04727 773 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 SP5Q6BEB4 398 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-205ENST00000439958 ZNF596Q8TC21 504 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 C11orf1Q9H5F2 150 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 ZANQ9Y493 2812 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms