RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 RBFOX2O43251 390 aaKnown RBP eCLIP18.56■□□□□ 0.563e-14■■■■■ 31.7
CPNE1-217ENST00000439669 NOL3O60936 208 aaKnown RBP18.56■□□□□ 0.56
CPNE1-217ENST00000439669 HSPB1P04792 205 aaKnown RBP18.56■□□□□ 0.56
CPNE1-217ENST00000439669 OR9G9P0C7N8 305 aa18.56■□□□□ 0.56
CPNE1-217ENST00000439669 DEFA5Q01523 94 aa18.56■□□□□ 0.56
CPNE1-217ENST00000439669 ADAD2Q8NCV1 583 aaKnown RBP18.56■□□□□ 0.56
CPNE1-217ENST00000439669 AIFM2Q9BRQ8 373 aa18.56■□□□□ 0.56
CPNE1-217ENST00000439669 ZMAT5Q9UDW3 170 aaKnown RBP18.56■□□□□ 0.56
CPNE1-217ENST00000439669 WI2-2373I1.2A0A1W2PRP0 233 aa18.55■□□□□ 0.56
CPNE1-217ENST00000439669 K7EIL1 84 aa18.55■□□□□ 0.56
CPNE1-217ENST00000439669 OVOL1O14753 267 aa18.55■□□□□ 0.56
CPNE1-217ENST00000439669 RLN1P04808 185 aa18.55■□□□□ 0.56
CPNE1-217ENST00000439669 RPL5P46777 297 aaKnown RBP18.55■□□□□ 0.56
CPNE1-217ENST00000439669 DGCR2P98153 550 aa18.55■□□□□ 0.56
CPNE1-217ENST00000439669 HRASLSQ9HDD0 168 aa18.55■□□□□ 0.56
CPNE1-217ENST00000439669 HPRT1P00492 218 aa18.54■□□□□ 0.56
CPNE1-217ENST00000439669 RPL27AP46776 148 aaKnown RBP18.54■□□□□ 0.56
CPNE1-217ENST00000439669 TMBIM6P55061 237 aa18.54■□□□□ 0.56
CPNE1-217ENST00000439669 CMTM1Q8IZ96 169 aa18.54■□□□□ 0.56
CPNE1-217ENST00000439669 CD300LFQ8TDQ1 290 aa18.54■□□□□ 0.56
CPNE1-217ENST00000439669 DLX4Q92988 240 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-217ENST00000439669 FYTTD1Q96QD9 318 aaKnown RBP18.54■□□□□ 0.56
CPNE1-217ENST00000439669 BCL7BQ9BQE9 202 aa18.54■□□□□ 0.56
CPNE1-217ENST00000439669 PRKDCP78527 4128 aaKnown RBP18.53■□□□□ 0.56
CPNE1-217ENST00000439669 HMX3A6NHT5 357 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 GPR31O00270 319 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 PGLYRP1O75594 196 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-217ENST00000439669 BRI3O95415 125 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 MAS1LP35410 378 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 TAS2R31P59538 309 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 RPL8P62917 257 aaKnown RBP18.53■□□□□ 0.56
CPNE1-217ENST00000439669 OR4A47Q6IF82 309 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 OR52I2Q8NH67 350 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 OR4A5Q8NH83 315 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 MIXL1Q9H2W2 232 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 BET1LQ9NYM9 111 aa18.53■□□□□ 0.56
CPNE1-217ENST00000439669 ANKRD34BA5PLL1 514 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 M0QYG6 137 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 S1PR2O95136 353 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 PRH1P02810 166 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 NQO2P16083 231 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 LAX1Q8IWV1 398 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 C15orf40Q8WUR7 153 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 PLEKHA2Q9HB19 425 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 RANGRFQ9HD47 186 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-217ENST00000439669 KLK11Q9UBX7 282 aa18.52■□□□□ 0.56
CPNE1-217ENST00000439669 DPPA5A6NC42 116 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 CTDSP2O14595 271 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 HLA-GP17693 338 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 S100GP29377 79 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 ECI1P42126 302 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 PHLDA2Q53GA4 152 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 DEFB121Q5J5C9 76 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 VAX1Q5SQQ9 334 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 SLC25A42Q86VD7 318 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 DMBX1Q8NFW5 382 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 USMG5Q96IX5 58 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 ABHD1Q96SE0 405 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 COMMD9Q9P000 198 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 CCDC59Q9P031 241 aaKnown RBP18.51■□□□□ 0.55
CPNE1-217ENST00000439669 SCOCQ9UIL1 159 aa18.51■□□□□ 0.55
CPNE1-217ENST00000439669 TEX22C9J3V5 150 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 TPPPO94811 219 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 IFNA6P05013 189 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 RPA2P15927 270 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 ERVK-16P61578 105 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 RHOGP84095 191 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 RNASE10Q5GAN6 216 aaKnown RBP18.5■□□□□ 0.55
CPNE1-217ENST00000439669 LPCAT3Q6P1A2 487 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 TTC9CQ8N5M4 171 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 DYNC2LI1Q8TCX1 351 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 TMEM140Q9NV12 185 aa18.5■□□□□ 0.55
CPNE1-217ENST00000439669 SAP30O75446 220 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 RBMXL2O75526 392 aaKnown RBP18.49■□□□□ 0.55
CPNE1-217ENST00000439669 IL6RP08887 468 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-217ENST00000439669 MYOD1P15172 320 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 ZP3P21754 424 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 F2RP25116 425 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 INSL3P51460 131 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 POU2AF1Q16633 256 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 FCAMRQ8WWV6 532 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 DGCR14Q96DF8 476 aaKnown RBP18.49■□□□□ 0.55
CPNE1-217ENST00000439669 AKIP1Q9NQ31 210 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 MTFP1Q9UDX5 166 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 ZNF257Q9Y2Q1 563 aa18.49■□□□□ 0.55
CPNE1-217ENST00000439669 FAM223BA6NKX1 122 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 E7EUB6 86 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 ZNF735P0CB33 412 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 ZNF45Q02386 682 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 ZNF343Q6P1L6 599 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 FAM223AQ8IWN6 122 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 ISOC1Q96CN7 298 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 SLC2A9Q9NRM0 540 aa18.48■□□□□ 0.55
CPNE1-217ENST00000439669 TRAV3A0A0B4J244 114 aa18.47■□□□□ 0.55
CPNE1-217ENST00000439669 A0A1B0GW64 132 aa18.47■□□□□ 0.55
CPNE1-217ENST00000439669 H3BMQ9 156 aa18.47■□□□□ 0.55
CPNE1-217ENST00000439669 UPK2O00526 184 aa18.47■□□□□ 0.55
CPNE1-217ENST00000439669 CD3DP04234 171 aa18.47■□□□□ 0.55
CPNE1-217ENST00000439669 LPAR6P43657 344 aa18.47■□□□□ 0.55
CPNE1-217ENST00000439669 ATP5G2Q06055 141 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms