RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 LDLRAD1Q5T700 205 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 C6orf106Q9H6K1 298 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-209ENST00000437951 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 H2BFSP57053 126 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 WDR54Q9H977 334 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-209ENST00000437951 HSPE1P61604 102 aaKnown RBP9.95□□□□□ -0.82
PTCH1-209ENST00000437951 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 MGST3O14880 152 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 AGFG2O95081 481 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 PPBPP02775 128 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 ADRA2AP08913 450 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 SNRPD3P62318 126 aaKnown RBP9.95□□□□□ -0.82
PTCH1-209ENST00000437951 FOXQ1Q9C009 403 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 DLEC1Q9Y238 1755 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 C9orf172C9J069 976 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 C1QL1O75973 258 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 EFNB2P52799 333 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 FAM159AQ6UWV7 190 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 MED12Q93074 2177 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 HAX1O00165 279 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
PTCH1-209ENST00000437951 FAM157AC9JC47 383 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 CLDND2Q8NHS1 167 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 ZNF479Q96JC4 524 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 MS4A5Q9H3V2 200 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 SSTR5P35346 364 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 GFRA1P56159 465 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 ZIC1Q15915 447 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 KIAA1644Q3SXP7 199 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 TNFRSF18Q9Y5U5 241 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 PPIAL4DF5H284 164 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 FGFRL1Q8N441 504 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 FZR1Q9UM11 496 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-209ENST00000437951 ACACAQ13085 2346 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 BGLAPP02818 100 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 RHOGP84095 191 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 RASL11AQ6T310 242 aa9.94□□□□□ -0.82
PTCH1-209ENST00000437951 COX6B1P14854 86 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 FUT5Q11128 374 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 ATP5L2Q7Z4Y8 100 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 TRBV5-3A0A0A0MS03 114 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 MARCH11A6NNE9 402 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
PTCH1-209ENST00000437951 LHX8Q68G74 356 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 CADM4Q8NFZ8 388 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 NPFFR1Q9GZQ6 430 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 HEATR5AQ86XA9 2040 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
PTCH1-209ENST00000437951 SCN7AQ01118 1682 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 RGPD3A6NKT7 1758 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-209ENST00000437951 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 FSCN3Q9NQT6 498 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 ALPK2Q86TB3 2170 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 PEX7O00628 323 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 OR52M1Q8NGK5 317 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 SDF2L1Q9HCN8 221 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 A0A1W2PR80 420 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 UBE2V1Q13404 147 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 TMEM187Q14656 261 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 PMVKQ15126 192 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 ORMDL2Q53FV1 153 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 GOLT1AQ6ZVE7 132 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 KLK15Q9H2R5 256 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 COX11Q9Y6N1 276 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 NDUFA2O43678 99 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 HBDP02042 147 aa9.93□□□□□ -0.82
PTCH1-209ENST00000437951 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-209ENST00000437951 IFI6P09912 130 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 RPL31P62899 125 aaKnown RBP9.92□□□□□ -0.82
PTCH1-209ENST00000437951 GNRHR2Q96P88 292 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 RSPO3Q9BXY4 272 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-209ENST00000437951 NXPH1P58417 271 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 FAM106AQ4KMX7 169 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 ZNF488Q96MN9 340 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 CITED2Q99967 270 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-209ENST00000437951 SRSF1Q07955 248 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTCH1-209ENST00000437951 CLEC2AQ6UVW9 174 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 NABP2Q9BQ15 211 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 APOBEC4Q8WW27 367 aaKnown RBP9.92□□□□□ -0.82
PTCH1-209ENST00000437951 EDA2RQ9HAV5 297 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 BCORQ6W2J9 1755 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 SPTY2D1-AS1A0A0U1RR47 76 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 GFERP55789 205 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 DDX60LQ5H9U9 1706 aaKnown RBP9.92□□□□□ -0.82
PTCH1-209ENST00000437951 H0Y8X5 98 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 NPCDR1Q9BY65 106 aa9.92□□□□□ -0.82
PTCH1-209ENST00000437951 OR11H4Q8NGC9 324 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 FAM27BQ5VT28 67 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 GPBAR1Q8TDU6 330 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 TRBV5-7A0A0A0MS05 114 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 A0A0G2JLM5 398 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 C1orf194Q5T5A4 169 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 SHISA5Q8N114 240 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms