RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 TINAGL1Q9GZM7 467 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-203ENST00000435823 NXF2Q9GZY0 626 aaKnown RBP8.93□□□□□ -0.98
COL28A1-203ENST00000435823 RBM38Q9H0Z9 239 aaKnown RBP8.93□□□□□ -0.98
COL28A1-203ENST00000435823 SLA2Q9H6Q3 261 aa8.93□□□□□ -0.98
COL28A1-203ENST00000435823 ZNF430Q9H8G1 570 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-203ENST00000435823 ZNF355PQ9NSJ1 428 aa8.93□□□□□ -0.98
COL28A1-203ENST00000435823 MSGN1A6NI15 193 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 H3BUA1 57 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 CCL24O00175 119 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 SOX15O60248 233 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 RAB3DO95716 219 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 PGAM2P15259 253 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 NQO2P16083 231 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 F2RP25116 425 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 TNFSF8P32971 234 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 S100A5P33763 92 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 MAS1LP35410 378 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 RAB25P57735 213 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 TPPP2P59282 170 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 ERVK-16P61578 105 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 MEF2DQ14814 521 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 MRGPRG-AS1Q2M3A8 158 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 STEAP1BQ6NZ63 245 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 ETV3LQ6ZN32 361 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 SSX9Q7RTT3 188 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 C1QL4Q86Z23 238 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 MRPL41Q8IXM3 137 aaKnown RBP8.92□□□□□ -0.98
COL28A1-203ENST00000435823 PUSL1Q8N0Z8 303 aaKnown RBP8.92□□□□□ -0.98
COL28A1-203ENST00000435823 LINC00482Q8N8I6 264 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 OR5T1Q8NG75 326 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 OR4A5Q8NH83 315 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 TMEM167AQ8TBQ9 72 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 DGCR14Q96DF8 476 aaKnown RBP8.92□□□□□ -0.98
COL28A1-203ENST00000435823 RCC1LQ96I51 464 aaKnown RBP8.92□□□□□ -0.98
COL28A1-203ENST00000435823 MS4A10Q96PG2 267 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 P2RX4Q99571 388 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 SPIN2AQ99865 258 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 SPIN2BQ9BPZ2 258 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 RSRP1Q9BUV0 290 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 HRASLSQ9HDD0 168 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 COMMD9Q9P000 198 aa8.92□□□□□ -0.98
COL28A1-203ENST00000435823 G3V4G9 280 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 GSTZ1O43708 216 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-203ENST00000435823 S1PR2O95136 353 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 DUS4LO95620 317 aaKnown RBP8.91□□□□□ -0.98
COL28A1-203ENST00000435823 TRGV3P03979 118 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 CD74P04233 296 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 DEFA6Q01524 100 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 KIAA0141Q14154 515 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-203ENST00000435823 DEFB136Q30KP8 78 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 SCGB2B2Q4G0G5 96 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 SAMD5Q5TGI4 173 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 OR4A47Q6IF82 309 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 DMBX1Q8NFW5 382 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 CASTOR1Q8WTX7 329 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 ZNF486Q96H40 463 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-203ENST00000435823 RAX2Q96IS3 184 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 OR5B12Q96R08 314 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
COL28A1-203ENST00000435823 GPR61Q9BZJ8 451 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 GNB4Q9HAV0 340 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 COA4Q9NYJ1 87 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 BET1LQ9NYM9 111 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
COL28A1-203ENST00000435823 A0A0G2JLM5 398 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 DISC1C4P0D8 188 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.98
COL28A1-203ENST00000435823 AKAIN1P0CW23 69 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 APELAP0DMC3 54 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 IGLL1P15814 213 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 LPAR6P43657 344 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 RPL27AP46776 148 aaKnown RBP8.9□□□□□ -0.98
COL28A1-203ENST00000435823 PPP5CP53041 499 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 RPL8P62917 257 aaKnown RBP8.9□□□□□ -0.98
COL28A1-203ENST00000435823 RUNX1Q01196 453 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 POU2AF1Q16633 256 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 C10orf55Q5SWW7 151 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 TBC1D26Q86UD7 250 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 SLC25A42Q86VD7 318 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 LHFPL1Q86WI0 220 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 OR11H1Q8NG94 326 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 OR4D10Q8NGI6 311 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 OR1N2Q8NGR9 330 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 TERB2Q8NHR7 220 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 SLC2A9Q9NRM0 540 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 NDUFA13Q9P0J0 144 aa8.9□□□□□ -0.98
COL28A1-203ENST00000435823 C13orf42A0A1B0GVH6 325 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 DPPA5A6NC42 116 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 I3L521 148 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 BRI3O95415 125 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 OR8U8P0C7N1 319 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 OR9G9P0C7N8 305 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 HLA-GP17693 338 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 ECI1P42126 302 aa8.89□□□□□ -0.99
COL28A1-203ENST00000435823 ZNF616Q08AN1 781 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms