RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 DUX4L9Q6RFH8 374 aaPredicted RBP15.32■□□□□ 0.04
CLK1-205ENST00000434813 TCF23Q7RTU1 214 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 NUP37Q8NFH4 326 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 RAB1CQ92928 201 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 LEAP2Q969E1 77 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 FAM210BQ96KR6 192 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 HEYLQ9NQ87 328 aaPredicted RBP15.32■□□□□ 0.04
CLK1-205ENST00000434813 CADP27708 2225 aa15.32■□□□□ 0.04
CLK1-205ENST00000434813 DSCAMO60469 2012 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TRAV3A0A0B4J244 114 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 C15orf61A6NNL5 157 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TGOLN2O43493 480 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 CLN5O75503 358 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 THBS3P49746 956 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TMEM241Q24JQ0 296 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TMEM249Q2WGJ8 235 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 C22orf34Q6ZV56 151 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 CISD2Q8N5K1 135 aaKnown RBP15.31■□□□□ 0.04
CLK1-205ENST00000434813 ZNF439Q8NDP4 499 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TCF19Q9Y242 345 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TANC2Q9HCD6 1990 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TRBV24-1A0A075B6N3 115 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 HOXA5P20719 270 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 BMP5P22003 454 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 ADIRFQ15847 76 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 TMEM30BQ3MIR4 351 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 SLC16A13Q7RTY0 426 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 GATAD1Q8WUU5 269 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 RPUSD4Q96CM3 377 aaKnown RBP15.31■□□□□ 0.04
CLK1-205ENST00000434813 SSX3Q99909 188 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 PARLQ9H300 379 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 LINC00574Q9H8X3 128 aa15.31■□□□□ 0.04
CLK1-205ENST00000434813 RAI1Q7Z5J4 1906 aaPredicted RBP15.3■□□□□ 0.04
CLK1-205ENST00000434813 SMCO3A2RU48 225 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 PRRG2O14669 202 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 RRHO14718 337 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 NCMAPQ5T1S8 102 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 ZNF788Q6ZQV5 615 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 OR4F5Q8NH21 305 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 NANPQ8TBE9 248 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 ADTRPQ96IZ2 230 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 OR4F4Q96R69 305 aa15.3■□□□□ 0.04
CLK1-205ENST00000434813 ZNF729A6NN14 1252 aaPredicted RBP15.29■□□□□ 0.04
CLK1-205ENST00000434813 DEFA4P12838 97 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 OPRK1P41145 380 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 TMEM170AQ8WVE7 144 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 IDI2-AS1Q9NZ38 188 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 DOK5Q9P104 306 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 FOXA2Q9Y261 457 aaPredicted RBP15.29■□□□□ 0.04
CLK1-205ENST00000434813 RAXQ9Y2V3 346 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BKO60814 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 PAGE4O60829 102 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BJP06899 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BOP23527 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BBP33778 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BDP58876 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BCP62807 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 RPL23P62829 140 aaKnown RBP15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST2H2BEQ16778 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 BSXQ3C1V8 233 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.29■□□□□ 0.04
CLK1-205ENST00000434813 TEX36Q5VZQ5 186 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 Q8NA96 180 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BHQ93079 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 NEIL1Q96FI4 390 aaPredicted RBP15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BNQ99877 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 HIST1H2BMQ99879 126 aa15.29■□□□□ 0.04
CLK1-205ENST00000434813 TRGC2P03986 189 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 FAM87AP0C7U9 286 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 C1QTNF9P0C862 333 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 MRPS11P82912 194 aaKnown RBP15.28■□□□□ 0.04
CLK1-205ENST00000434813 POU2AF1Q16633 256 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 OR4A47Q6IF82 309 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 UNQ6494/PRO21346Q6UXR6 183 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 FAM216BQ8N7L0 139 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 ZNF383Q8NA42 475 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 CORO2AQ92828 525 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 RHOVQ96L33 236 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 CCL13Q99616 98 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 MS4A5Q9H3V2 200 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 TMEM14BQ9NUH8 114 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 BSNQ9UPA5 3926 aa15.28■□□□□ 0.04
CLK1-205ENST00000434813 IRF2P14316 349 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 CDX1P47902 265 aaPredicted RBP15.27■□□□□ 0.04
CLK1-205ENST00000434813 TDGF1P3P51864 188 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 GCSAMLQ5JQS6 135 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 TMEM108Q6UXF1 575 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 LYG1Q8N1E2 194 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 DEFB108BQ8NET1 73 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 MGST2Q99735 147 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 GGTLC1Q9BX51 225 aa15.27■□□□□ 0.04
CLK1-205ENST00000434813 TET2Q6N021 2002 aaPredicted RBP15.27■□□□□ 0.04
CLK1-205ENST00000434813 YIF1AO95070 293 aa15.27■□□□□ 0.03
CLK1-205ENST00000434813 GYPAP02724 150 aa15.27■□□□□ 0.03
CLK1-205ENST00000434813 GFRALQ6UXV0 394 aa15.27■□□□□ 0.03
CLK1-205ENST00000434813 C16orf82Q7Z2V1 217 aa15.27■□□□□ 0.03
CLK1-205ENST00000434813 ABHD12Q8N2K0 398 aa15.27■□□□□ 0.03
CLK1-205ENST00000434813 KCNIP2Q9NS61 270 aa15.27■□□□□ 0.03
CLK1-205ENST00000434813 CHD8Q9HCK8 2581 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms