RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SLC31A2O15432 143 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 YIF1AO95070 293 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 CXorf1O96002 111 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 TRGC1P0CF51 173 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 CD99P14209 185 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 TNFRSF1AP19438 455 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 GALR1P47211 349 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 TMEM108Q6UXF1 575 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 CHODLQ9H9P2 273 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 BDP1A6H8Y1 2624 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 SAA2-SAA4A0A096LPE2 208 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 MKRN2OSH3BPM6 223 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 RRHO14718 337 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 MT-CO2P00403 227 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 SAA2P0DJI9 122 aaPredicted RBP8.58□□□□□ -1.04
CD44-210ENST00000434472 NPY1RP25929 384 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 MEF2CQ06413 473 aaPredicted RBP8.58□□□□□ -1.04
CD44-210ENST00000434472 RTL8BQ17RB0 113 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 DNLZQ5SXM8 178 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 OR4A47Q6IF82 309 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 KCNIP4Q6PIL6 250 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 LYG1Q8N1E2 194 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 RPRMLQ8N4K4 120 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 CISD2Q8N5K1 135 aaKnown RBP8.58□□□□□ -1.04
CD44-210ENST00000434472 SLC24A4Q8NFF2 622 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 RHOVQ96L33 236 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 TMEM204Q9BSN7 226 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 TMEM14BQ9NUH8 114 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 FKBP11Q9NYL4 201 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 RPUSD1Q9UJJ7 312 aaKnown RBP8.58□□□□□ -1.04
CD44-210ENST00000434472 ZNF257Q9Y2Q1 563 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 PXMP4Q9Y6I8 212 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 PTPRBP23467 1997 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 FRYLO94915 3013 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 GTF3C1Q12789 2109 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 VSTM5A8MXK1 200 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 PRRG2O14669 202 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 FAM27E3Q08E93 113 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 TEPPQ6URK8 271 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 SPNS3Q6ZMD2 512 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
CD44-210ENST00000434472 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 ABHD12Q8N2K0 398 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 ZNF383Q8NA42 475 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 ABHD5Q8WTS1 349 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 FRZBQ92765 325 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 CCL13Q99616 98 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 MGST2Q99735 147 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 GAL3ST2Q9H3Q3 398 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 PITPNC1Q9UKF7 332 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 LINC00312Q9Y6C7 94 aa8.58□□□□□ -1.04
CD44-210ENST00000434472 TRAV38-1A0A0B4J264 116 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 PPP5D1E7EU14 171 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 C16orf97H3BN30 126 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 UPK2O00526 184 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 DLL1O00548 723 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 KLK10O43240 276 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 IGHV3-7P01780 117 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 IL6RP08887 468 aaPredicted RBP8.57□□□□□ -1.04
CD44-210ENST00000434472 SELLP14151 372 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 RPL29P47914 159 aaKnown RBP8.57□□□□□ -1.04
CD44-210ENST00000434472 FAM3BP58499 235 aaPredicted RBP8.57□□□□□ -1.04
CD44-210ENST00000434472 RHOBP62745 196 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 FAM201AQ5SY85 155 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 CST9LP1Q5W188 147 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 OR51G1Q8NGK1 321 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 IMMP2LQ96T52 175 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 SSX3Q99909 188 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 SLC35D1Q9NTN3 355 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 LSM4Q9Y4Z0 139 aaKnown RBP8.57□□□□□ -1.04
CD44-210ENST00000434472 OR51B2Q9Y5P1 312 aa8.57□□□□□ -1.04
CD44-210ENST00000434472 INTS1Q8N201 2190 aaKnown RBP8.56□□□□□ -1.04
CD44-210ENST00000434472 PHOX2AO14813 284 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 GGCTO75223 188 aaKnown RBP8.56□□□□□ -1.04
CD44-210ENST00000434472 TYMSP04818 313 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 BMP5P22003 454 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 GNB1P62873 340 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 PRCDQ00LT1 54 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 MIC13Q5XKP0 118 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
CD44-210ENST00000434472 TCF23Q7RTU1 214 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 FAM216BQ8N7L0 139 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 DEFB108BQ8NET1 73 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 OR2T10Q8NGZ9 312 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 TMEM170AQ8WVE7 144 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 LEAP2Q969E1 77 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 PLEKHA3Q9HB20 300 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 MIOXQ9UGB7 285 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 USF3Q68DE3 2245 aa8.56□□□□□ -1.04
CD44-210ENST00000434472 IFITM10A6NMD0 228 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms