RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 DUX4L9Q6RFH8 374 aaPredicted RBP9.81□□□□□ -0.84
CTCFL-209ENST00000433949 LYG1Q8N1E2 194 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 ZNF709Q8N972 641 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 RAB39BQ96DA2 213 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 GGACTQ9BVM4 153 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 RPS10P5Q9NQ39 176 aa9.81□□□□□ -0.84
CTCFL-209ENST00000433949 CISD1Q9NZ45 108 aaKnown RBP9.81□□□□□ -0.84
CTCFL-209ENST00000433949 USP9YO00507 2555 aaPredicted RBP9.81□□□□□ -0.84
CTCFL-209ENST00000433949 C7orf77A4D0Y5 90 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 J3QKU1 62 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 IFNA1P01562 189 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 ARG1P05089 322 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 SRP19P09132 144 aaKnown RBP9.8□□□□□ -0.84
CTCFL-209ENST00000433949 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 DAOP14920 347 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 APOBEC3AP31941 199 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-209ENST00000433949 RPL31P62899 125 aaKnown RBP9.8□□□□□ -0.84
CTCFL-209ENST00000433949 RELBQ01201 579 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 POU2AF1Q16633 256 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 HAGHQ16775 308 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 FAM122CQ6P4D5 195 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 RCC1LQ96I51 464 aaKnown RBP9.8□□□□□ -0.84
CTCFL-209ENST00000433949 DYNLRB1Q9NP97 96 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 TMEM106BQ9NUM4 274 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 TMEM140Q9NV12 185 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
CTCFL-209ENST00000433949 NDUFA2O43678 99 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 IGHV3-7P01780 117 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 FGF7P21781 194 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
CTCFL-209ENST00000433949 ICAM4Q14773 271 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 EFNB3Q15768 340 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 SSX9Q7RTT3 188 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 RHOVQ96L33 236 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 P2RX4Q99571 388 aa9.8□□□□□ -0.84
CTCFL-209ENST00000433949 LOC102723971A0A1B0GUV8 181 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 C15orf62A8K5M9 175 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 B9A039 149 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 MPDU1O75352 247 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 SNRNP70P08621 437 aaKnown RBP9.79□□□□□ -0.84
CTCFL-209ENST00000433949 COL8A1P27658 744 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 OR2B8PP59922 312 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 RTL8BQ17RB0 113 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 LRRC10Q5BKY1 277 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 HEPN1Q6WQI6 88 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
CTCFL-209ENST00000433949 SLC39A9Q9NUM3 307 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 DCAF16Q9NXF7 216 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 KAAG1Q9UBP8 84 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 MLXQ9UH92 298 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 NDUFB3O43676 98 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 IFNA10P01566 189 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 BCL2P10415 239 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 MDKP21741 143 aaPredicted RBP9.79□□□□□ -0.84
CTCFL-209ENST00000433949 RAB11AP62491 216 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 RBMS3Q6XE24 437 aaKnown RBP9.79□□□□□ -0.84
CTCFL-209ENST00000433949 TGIF2LYQ8IUE0 185 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 CCL17Q92583 94 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 LEAP2Q969E1 77 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 NPCDR1Q9BY65 106 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 VSIRQ9H7M9 311 aa9.79□□□□□ -0.84
CTCFL-209ENST00000433949 FOXA2Q9Y261 457 aaPredicted RBP9.79□□□□□ -0.84
CTCFL-209ENST00000433949 CTXND1A0A1B0GTU2 59 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 NDUFS6O75380 124 aaKnown RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 IGFBP2P18065 325 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 LOXP28300 417 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 CD1BP29016 333 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 ELLP55199 621 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 AVPI1Q5T686 147 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 ZNF383Q8NA42 475 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 RXFP4Q8TDU9 374 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 TMEM14BQ9NUH8 114 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 GNG13Q9P2W3 67 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 A0A1W2PPE3 182 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 TNFRSF13BO14836 293 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 VDAC2P45880 294 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 GNG10P50151 68 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 HSPE1P61604 102 aaKnown RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 ZNF672Q499Z4 452 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 RPP25LQ8N5L8 163 aaKnown RBP9.78□□□□□ -0.84
CTCFL-209ENST00000433949 C8orf31Q8N9H6 132 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 LHX4Q969G2 390 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 PRNDQ9UKY0 176 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
CTCFL-209ENST00000433949 WDR83OSQ9Y284 106 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms