RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MOB3AQ96BX8 217 aa4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 FYTTD1Q96QD9 318 aaKnown RBP4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 BCL7BQ9BQE9 202 aa4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 SLIRPQ9GZT3 109 aaKnown RBP4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 ALX4Q9H161 411 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 CCDC59Q9P031 241 aaKnown RBP4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 RSL24D1Q9UHA3 163 aaKnown RBP4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 ANAPC10Q9UM13 185 aa4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 STAB1Q9NY15 2570 aa4.5□□□□□ -1.69
HMGB3P24-201ENST00000433260 TRAV3A0A0B4J244 114 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 HMX3A6NHT5 357 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 GABARAPH6UMI1 98 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 GPR31O00270 319 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 MPPED1O15442 326 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 ACTL6BO94805 426 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR2A4O95047 310 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 SPDEFO95238 335 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 RAB3DO95716 219 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 HPRT1P00492 218 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 HRASP01112 189 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 PRH1P02810 166 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 TRGV3P03979 118 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 RLN1P04808 185 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 SAA1P0DJI8 122 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 PGAM2P15259 253 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 PI3P19957 117 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 PSMB8P28062 276 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 CD40LGP29965 261 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 S100A5P33763 92 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 CDX1P47902 265 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 TAS2R19P59542 299 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 UBE2KP61086 200 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 SSBP2P81877 361 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 DEFA5Q01523 94 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 FOXE3Q13461 319 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 KIAA0141Q14154 515 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 PRSS8Q16651 343 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 SCGB2B2Q4G0G5 96 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 RNASE10Q5GAN6 216 aaKnown RBP4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 ASPHD1Q5U4P2 390 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 PYHIN1Q6K0P9 492 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 FAAP20Q6NZ36 180 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 CMTM1Q8IZ96 169 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF491Q8N8L2 437 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 TMEM229BQ8NBD8 167 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 DMBX1Q8NFW5 382 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR11H1Q8NG94 326 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR4D10Q8NGI6 311 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR1N2Q8NGR9 330 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR4S2Q8NH73 311 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 RAX2Q96IS3 184 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR2A7Q96R45 310 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 FXYD6Q9H0Q3 95 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF430Q9H8G1 570 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 GNB4Q9HAV0 340 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 HRASLSQ9HDD0 168 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 MTFP1Q9UDX5 166 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 FBXL7Q9UJT9 491 aa4.49□□□□□ -1.69
HMGB3P24-201ENST00000433260 DPPA5A6NC42 116 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 E7EUB6 86 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 CCL24O00175 119 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 KBTBD11O94819 623 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 S1PR2O95136 353 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 KRASP01116 189 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 F2RP25116 425 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 G6PCP35575 357 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 MYCNOSP40205 109 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 KIR2DS2P43631 304 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 PPP5CP53041 499 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 TPPP2P59282 170 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 MLANAQ16655 118 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 TM4SF20Q53R12 229 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 PYDC2Q56P42 97 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 VAX1Q5SQQ9 334 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 C10orf55Q5SWW7 151 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR4A47Q6IF82 309 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 STEAP1BQ6NZ63 245 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 ETV3LQ6ZN32 361 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 TBC1D26Q86UD7 250 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 MMD2Q8IY49 270 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 PUSL1Q8N0Z8 303 aaKnown RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 POC5Q8NA72 575 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 WFDC9Q8NEX5 89 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 OR5M8Q8NGP6 311 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 MARCH1Q8TCQ1 289 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 SRSF12Q8WXF0 261 aaKnown RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 DPF1Q92782 380 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 BORCS5Q969J3 196 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 DGCR14Q96DF8 476 aaKnown RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 UBE2E2Q96LR5 201 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 THAP7Q9BT49 309 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 NXF2Q9GZY0 626 aaKnown RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 RBM38Q9H0Z9 239 aaKnown RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 COA4Q9NYJ1 87 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 VSIG4Q9Y279 399 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 NSG2Q9Y328 171 aa4.48□□□□□ -1.69
HMGB3P24-201ENST00000433260 TENM1Q9UKZ4 2725 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 IGHV4OR15-8A0A075B7B6 117 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms