RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 IGKV1D-8A0A087WSZ0 117 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-203ENST00000432581 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 TMEM213A2RRL7 107 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 J3QRK9 145 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 HLA-DQB1P01920 261 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 CRYGCP07315 174 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-203ENST00000432581 HIST1H1BP16401 226 aaKnown RBP11.15□□□□□ -0.62
PRKDC-203ENST00000432581 MYL9P24844 172 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 OR2B11Q5JQS5 317 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 VKORC1L1Q8N0U8 176 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.62
PRKDC-203ENST00000432581 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 FYTTD1Q96QD9 318 aaKnown RBP11.15□□□□□ -0.62
PRKDC-203ENST00000432581 HSD17B10Q99714 261 aaKnown RBP11.15□□□□□ -0.62
PRKDC-203ENST00000432581 CCDC90BQ9GZT6 254 aa11.15□□□□□ -0.62
PRKDC-203ENST00000432581 TRAV25A0A0B4J276 109 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 NDUFB8O95169 186 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 ZNF735P0CB33 412 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 PSMB6P28072 239 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 OR10A3P58181 314 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 RPL30P62888 115 aaKnown RBP11.14□□□□□ -0.63
PRKDC-203ENST00000432581 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 UXS1Q8NBZ7 420 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 TCTEX1D2Q8WW35 142 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 MARC2Q969Z3 335 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 ST6GALNAC5Q9BVH7 336 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 DCSTAMPQ9H295 470 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 MLXQ9UH92 298 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
PRKDC-203ENST00000432581 TRBV7-1A0A0A6YYK4 115 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 CXorf65A6NEN9 183 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 NUPR2A6NF83 97 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 SCAF4O95104 1147 aaKnown RBP11.13□□□□□ -0.63
PRKDC-203ENST00000432581 LY6G6CO95867 125 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 IGLV2-14P01704 120 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 CTRB1P17538 263 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 RAB3BP20337 219 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 NFYAP23511 347 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-203ENST00000432581 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 CXorf58Q96LI9 332 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
PRKDC-203ENST00000432581 A0A1B0GW64 132 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 E7EUB6 86 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 HRASP01112 189 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 DEFA4P12838 97 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 AREGP15514 252 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 GALP22466 123 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 RPL8P62917 257 aaKnown RBP11.12□□□□□ -0.63
PRKDC-203ENST00000432581 EIF4EBP1Q13541 118 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-203ENST00000432581 TM4SF20Q53R12 229 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 HACD4Q5VWC8 232 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 BTNL8Q6UX41 500 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
PRKDC-203ENST00000432581 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 WFDC3Q8IUB2 231 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 OR1L6Q8NGR2 347 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 AIFM2Q9BRQ8 373 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 ELF5Q9UKW6 265 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-203ENST00000432581 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 TP53TG1Q9Y2A0 90 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
PRKDC-203ENST00000432581 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 IGKV1D-13A0A0B4J2D9 117 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 IGKV1-13P0DP09 117 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 HLA-GP17693 338 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 CRHBPP24387 322 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 APOC4P55056 127 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 AQP4P55087 323 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 TNFRSF9Q07011 255 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
PRKDC-203ENST00000432581 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
PRKDC-203ENST00000432581 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 S4R3C0 116 aa11.11□□□□□ -0.63
PRKDC-203ENST00000432581 TRDV1A0A1B0GX56 115 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 SCGNO76038 276 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 CLEC3BP05452 202 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 BMI1P35226 326 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 ELLP55199 621 aaPredicted RBP11.1□□□□□ -0.63
PRKDC-203ENST00000432581 BRWD1-AS2P59051 145 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 Q6ZWC4 215 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 SSX9Q7RTT3 188 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 NDUFB11Q9NX14 153 aa11.1□□□□□ -0.63
PRKDC-203ENST00000432581 TAS2R8Q9NYW2 309 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms