RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TMEM140Q9NV12 185 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 CADP27708 2225 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 TNFRSF13BO14836 293 aaPredicted RBP10.53□□□□□ -0.72
DDX56-204ENST00000431640 IFNA10P01566 189 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 IGHV3-7P01780 117 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 SNRNP70P08621 437 aaKnown RBP10.53□□□□□ -0.72
DDX56-204ENST00000431640 IGFBP2P18065 325 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 MDKP21741 143 aaPredicted RBP10.53□□□□□ -0.72
DDX56-204ENST00000431640 FGF7P21781 194 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
DDX56-204ENST00000431640 RTL8BQ17RB0 113 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 HFEQ30201 348 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 AWAT1Q58HT5 328 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 HEPN1Q6WQI6 88 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 RXFP4Q8TDU9 374 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 CCL17Q92583 94 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 LEAP2Q969E1 77 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 TANC2Q9HCD6 1990 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 DSCAML1Q8TD84 2053 aa10.53□□□□□ -0.72
DDX56-204ENST00000431640 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
DDX56-204ENST00000431640 A0A1W2PPE3 182 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 C15orf61A6NNL5 157 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 C15orf62A8K5M9 175 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 CYB5BO43169 146 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 ARG1P05089 322 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 CD1BP29016 333 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 VDAC2P45880 294 aaPredicted RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 ATP5IP56385 69 aaPredicted RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 OR2B8PP59922 312 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 HSPE1P61604 102 aaKnown RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 LCN15Q6UWW0 184 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 DMRTC2Q8IXT2 367 aaPredicted RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 C8orf31Q8N9H6 132 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 ZNF383Q8NA42 475 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 RCC1LQ96I51 464 aaKnown RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 RHOVQ96L33 236 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 ACTR3CQ9C0K3 210 aaPredicted RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 VSIRQ9H7M9 311 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 ENY2Q9NPA8 101 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 FKBP11Q9NYL4 201 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 MLXQ9UH92 298 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 PRNDQ9UKY0 176 aa10.52□□□□□ -0.72
DDX56-204ENST00000431640 FOXA2Q9Y261 457 aaPredicted RBP10.52□□□□□ -0.72
DDX56-204ENST00000431640 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 ANKHD1Q8IWZ3 2542 aaKnown RBP10.52□□□□□ -0.73
DDX56-204ENST00000431640 CTXND1A0A1B0GTU2 59 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 MAP1LC3B2A6NCE7 125 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 COLCA2A8K830 154 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 BCL2P10415 239 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 ZNF726P1Q15940 193 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 RNF212Q495C1 297 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 AKIRIN2Q53H80 203 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 AVPI1Q5T686 147 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 TMEM200BQ69YZ2 307 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 OR4A47Q6IF82 309 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 ETV3LQ6ZN32 361 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
DDX56-204ENST00000431640 TGIF2LYQ8IUE0 185 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 ZCCHC24Q8N2G6 241 aaKnown RBP10.52□□□□□ -0.73
DDX56-204ENST00000431640 LHX4Q969G2 390 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 TVP23CQ96ET8 276 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 MAP1LC3BQ9GZQ8 125 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 GNG13Q9P2W3 67 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
DDX56-204ENST00000431640 FSTL3O95633 263 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 CT45A6P0DMU7 189 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 CT45A5P0DMU8 189 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 CT45A7P0DMV0 189 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 FOLR2P14207 255 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 HOXA1P49639 335 aaPredicted RBP10.51□□□□□ -0.73
DDX56-204ENST00000431640 GNG10P50151 68 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 ELLP55199 621 aaPredicted RBP10.51□□□□□ -0.73
DDX56-204ENST00000431640 DLK1P80370 383 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
DDX56-204ENST00000431640 SPINK9Q5DT21 86 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 FFAR4Q5NUL3 377 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 FAM71F2Q6NXP2 309 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 ZNF833PQ6ZTB9 187 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 VKORC1L1Q8N0U8 176 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 OR10G9Q8NGN4 311 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 OR10G7Q8NGN6 311 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 NPCDR1Q9BY65 106 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 SLC35D1Q9NTN3 355 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 TMEM14BQ9NUH8 114 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 WDR83OSQ9Y284 106 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
DDX56-204ENST00000431640 PUS1Q9Y606 427 aaKnown RBP eCLIP10.51□□□□□ -0.73
DDX56-204ENST00000431640 DCHS2Q6V1P9 2916 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 SPTBN1Q01082 2364 aaKnown RBP10.5□□□□□ -0.73
DDX56-204ENST00000431640 IGHV1-69-2A0A0G2JMI3 117 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.5□□□□□ -0.73
DDX56-204ENST00000431640 B4DEV8 164 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms