RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ELOVL1Q9BW60 279 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 FHL1Q13642 323 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 ERVS71-1P61550 626 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 TNFRSF14Q92956 283 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 COL4A3Q01955 1670 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 IGHV1-18A0A0C4DH31 117 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 HSBP1O75506 76 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 FAM157CP0CG43 387 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 PSG9Q00887 426 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 BATFQ16520 125 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 ZNF788Q6ZQV5 615 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 IL36RNQ9UBH0 155 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 ABCA4P78363 2273 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 MBD3L4A6NDZ8 208 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-208ENST00000430669 MBD3L3A6NE82 208 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-208ENST00000430669 MBD3L5A6NJ08 208 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-208ENST00000430669 NTF3P20783 257 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 SSTP61278 116 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 PDZD11Q5EBL8 140 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 ZNRF1Q8ND25 227 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 MBD3L2Q8NHZ7 208 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-208ENST00000430669 TCF19Q9Y242 345 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 RBM14Q96PK6 669 aaKnown RBP9.73□□□□□ -0.85
PTCH1-208ENST00000430669 A0A0A6YYD4 124 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 RBFOX2O43251 390 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTCH1-208ENST00000430669 A0A0B4J293 547 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 MFAP4P55083 255 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 WNT9BO14905 357 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 KLK2P20151 261 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 WNT5AP41221 380 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 OR4A47Q6IF82 309 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 DSCAMO60469 2012 aa9.73□□□□□ -0.85
PTCH1-208ENST00000430669 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 IFITM2Q01629 132 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 FAM27E3Q08E93 113 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 ZNF705AQ6ZN79 300 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-208ENST00000430669 LHFPL5Q8TAF8 219 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 OR4C12Q96R67 309 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 SMIM6P0DI80 62 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 FOSL1P15407 271 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 RELQ04864 619 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-208ENST00000430669 MED19A0JLT2 244 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-208ENST00000430669 CBLN4Q9NTU7 201 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 H0Y8G0 127 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 LINC00869P0C866 280 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 COL8A1P27658 744 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 TRAV24A0A0B4J272 114 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 MT-ND6P03923 174 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 SPNS3Q6ZMD2 512 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 TRBV9A0A0B4J1U6 114 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 A0A1W2PPE3 182 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 QRFPP83859 136 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 BPIFA4PQ86YQ2 179 aa9.72□□□□□ -0.85
PTCH1-208ENST00000430669 NBASA2RRP1 2371 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 ZNF735P0CB33 412 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 ZNF324BQ6AW86 544 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-208ENST00000430669 SNRNP40Q96DI7 357 aaKnown RBP9.71□□□□□ -0.85
PTCH1-208ENST00000430669 TNFRSF19Q9NS68 423 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 ZNF319Q9P2F9 582 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 TMEM250H0YL14 139 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 SSX7Q7RTT5 188 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 OR52E5Q8NH55 327 aa9.71□□□□□ -0.85
PTCH1-208ENST00000430669 RD3LP0DJH9 198 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 NPAS1Q99742 590 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 HILPDAQ9Y5L2 63 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 SLC25A17O43808 307 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 ACAA1P09110 424 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-208ENST00000430669 PMS2P11Q13670 270 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 ECSCRQ19T08 205 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 IGFL3Q6UXB1 125 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 EIF4E3Q8N5X7 224 aaKnown RBP9.71□□□□□ -0.86
PTCH1-208ENST00000430669 ZG16O60844 167 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 SAMD13Q5VXD3 122 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 SLC16A13Q7RTY0 426 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 LHFPL1Q86WI0 220 aa9.71□□□□□ -0.86
PTCH1-208ENST00000430669 KIAA1324LA8MWY0 1029 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-208ENST00000430669 TBR1Q16650 682 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 MORN2Q502X0 79 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 SH3BGRL3Q9H299 93 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 F8VVB4 439 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 F8VWA3 439 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 VENTXO95231 258 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 PTBP3O95758 552 aaKnown RBP9.7□□□□□ -0.86
PTCH1-208ENST00000430669 OR51G1Q8NGK1 321 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 H0YL77 283 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 NPCDR1Q9BY65 106 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 CUL9Q8IWT3 2517 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 C8orf88P0DMB2 117 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 RUNX1Q01196 453 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 DPF1Q92782 380 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 CRISP2P16562 243 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 IGF2-ASQ6U949 168 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 TMEM37Q8WXS4 190 aa9.7□□□□□ -0.86
PTCH1-208ENST00000430669 A8MWL6 223 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 SRRM5B3KS81 715 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms