RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GNGT2O14610 69 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BKO60814 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 REM1O75628 298 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CDRT1O95170 752 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TSPAN13O95857 204 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CD8AP01732 235 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 THY1P04216 161 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CD74P04233 296 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 P04436 131 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BJP06899 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SOD3P08294 240 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CD14P08571 375 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SLC35G6P0C7Q6 338 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SMIM17P0DL12 118 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR5H8P0DN80 308 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 GZMHP20718 246 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BOP23527 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 IL12BP29460 328 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HTR1FP30939 366 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BBP33778 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CEACAM3P40198 252 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CCR8P51685 355 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SLC25A1P53007 311 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 NDUFA6P56556 154 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR4D2P58180 307 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 MLF1P58340 268 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BDP58876 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 RAB10P61026 200 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BCP62807 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 PITPNAQ00169 270 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 EBPQ15125 230 aaKnown RBP3.08□□□□□ -1.92
HMGB3-203ENST00000430118 NSDHLQ15738 373 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 PRSS8Q16651 343 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST2H2BEQ16778 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 PLPPR5Q32ZL2 321 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SPANXN3Q5MJ09 141 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SAMD13Q5VXD3 122 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 NCBP2-AS2Q69YL0 99 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CALHM1Q8IU99 346 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 C20orf196Q8IYI0 205 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF100Q8IYN0 542 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TOMM5Q8N4H5 51 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SLC35G3Q8N808 338 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 C3orf56Q8N813 242 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF738Q8NE65 137 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SLC30A7Q8NEW0 376 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR11H1Q8NG94 326 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR4D6Q8NGJ1 314 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR51S1Q8NGJ8 323 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR5L1Q8NGL2 311 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR11H2Q8NH07 326 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR51F2Q8NH61 342 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 LINC01560Q8TB33 94 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SLC7A13Q8TCU3 470 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 RNF133Q8WVZ7 376 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 ASB17Q8WXJ9 295 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BHQ93079 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 PIK3IP1Q96FE7 263 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SFRP2Q96HF1 295 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 PRRC1Q96M27 445 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OXGR1Q96P68 337 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR7D2Q96RA2 312 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TBX15Q96SF7 602 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BNQ99877 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H2BMQ99879 126 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 MIEN1Q9BRT3 115 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 ADAT1Q9BUB4 502 aaKnown RBP3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SFXN3Q9BWM7 321 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR2J1Q9GZK6 312 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SLC25A31Q9H0C2 315 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CST9LQ9H4G1 147 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CBLN4Q9NTU7 201 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 LYRM2Q9NU23 88 aaPredicted RBP3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TXNL4BQ9NX01 149 aaKnown RBP3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TAS2R13Q9NYV9 303 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR5AC2Q9NZP5 309 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF223Q9UK11 482 aaPredicted RBP3.08□□□□□ -1.92
HMGB3-203ENST00000430118 HDGFL3Q9Y3E1 203 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 RHBDD3Q9Y3P4 386 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 ARL5AQ9Y689 179 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 SVEP1Q4LDE5 3571 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 PHF3Q92576 2039 aaKnown RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 KCNE1BA0A087WTH5 132 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 FXYD6-FXYD2A0A087WZ82 144 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 IGHV2OR16-5A0A0B4J2B6 119 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 A0A1B0GW64 132 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TRDV1A0A1B0GX56 115 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ANKRD20A5PA0PJZ0 165 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 C7orf77A4D0Y5 90 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ARRDC5A6NEK1 342 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 MANBAO00462 879 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 UBL3O95164 117 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 EPPINO95925 133 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SEMG1P04279 462 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SFTA3P0C7M3 94 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SMIM10L1P0DMW3 83 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TPT1P13693 172 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms