RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 VSIG4Q9Y279 399 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 WI2-2373I1.2A0A1W2PRP0 233 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 G3V318 75 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 FCN1O00602 326 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 MPPED1O15442 326 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 SPDEFO95238 335 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 CRYGBP07316 175 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 BTCP35070 178 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 CCR6P51684 374 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 SLC35B1P78383 322 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 ZNF585BQ52M93 769 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 TEX38Q6PEX7 206 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 RCC1LQ96I51 464 aaKnown RBP13.22□□□□□ -0.29
UBE3D-204ENST00000430071 ZFP57Q9NU63 452 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 METTL1Q9UBP6 276 aaKnown RBP13.22□□□□□ -0.29
UBE3D-204ENST00000430071 WSB1Q9Y6I7 421 aa13.22□□□□□ -0.29
UBE3D-204ENST00000430071 NAP1L6A6NFF2 107 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 S1PR2O95136 353 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 HLA-DRB1P01911 266 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 S100GP29377 79 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 REC114Q7Z4M0 266 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 VKORC1L1Q8N0U8 176 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 C7orf50Q9BRJ6 194 aaKnown RBP13.21□□□□□ -0.29
UBE3D-204ENST00000430071 C14orf166Q9Y224 244 aaKnown RBP13.21□□□□□ -0.29
UBE3D-204ENST00000430071 FBXO7Q9Y3I1 522 aa13.21□□□□□ -0.29
UBE3D-204ENST00000430071 IGHV7-81A0A0B4J1V7 117 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 UPK1BO75841 260 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 SAA1P0DJI8 122 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-204ENST00000430071 UBE2KP61086 200 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 NDPQ00604 133 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 IFITM3Q01628 133 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 PLGLAQ15195 96 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 MRGPRG-AS1Q2M3A8 158 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 LIN54Q6MZP7 749 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 COMMD1Q8N668 190 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 POC5Q8NA72 575 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 ADAD2Q8NCV1 583 aaKnown RBP13.2□□□□□ -0.3
UBE3D-204ENST00000430071 CD300LFQ8TDQ1 290 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 TMEM230Q96A57 120 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 KLK15Q9H2R5 256 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 TBC1D24Q9ULP9 559 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 CENPXA8MT69 81 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 HPRT1P00492 218 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 IGHG4P01861 327 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 PPIFP30405 207 aaKnown RBP13.2□□□□□ -0.3
UBE3D-204ENST00000430071 MYCNOSP40205 109 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 LPAR6P43657 344 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 FOXE3Q13461 319 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-204ENST00000430071 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 TCTEX1D1Q8N7M0 179 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 PLEKHA2Q9HB19 425 aa13.2□□□□□ -0.3
UBE3D-204ENST00000430071 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 CCL24O00175 119 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 LYRM1O43325 122 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 IGF1P05019 195 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 PSMB8P28062 276 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 CX3CL1P78423 397 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
UBE3D-204ENST00000430071 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
UBE3D-204ENST00000430071 SSX9Q7RTT3 188 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 PPP1R27Q86WC6 154 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 TEX45Q8NA69 505 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 RHOVQ96L33 236 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 SCGB3A2Q96PL1 93 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 SLC25A21Q9BQT8 299 aaPredicted RBP13.19□□□□□ -0.3
UBE3D-204ENST00000430071 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 PARP11Q9NR21 331 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 COMMD9Q9P000 198 aa13.19□□□□□ -0.3
UBE3D-204ENST00000430071 DNAH9Q9NYC9 4486 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 CRYM-AS1A6NIL9 109 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 H0Y980 276 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 CA2P00918 260 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 HRASP01112 189 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 ELANEP08246 267 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 RPA2P15927 270 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 RAB25P57735 213 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 TAS2R31P59538 309 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 EGFEM1PQ0D2K5 195 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 RBMS2Q15434 407 aaKnown RBP13.18□□□□□ -0.3
UBE3D-204ENST00000430071 POU2AF1Q16633 256 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 SP6Q3SY56 376 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 PUSL1Q8N0Z8 303 aaKnown RBP13.18□□□□□ -0.3
UBE3D-204ENST00000430071 CASTOR1Q8WTX7 329 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 NAA60Q9H7X0 242 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 GNB4Q9HAV0 340 aa13.18□□□□□ -0.3
UBE3D-204ENST00000430071 FAM212BQ9NTI7 297 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-204ENST00000430071 TEX13DA0A0J9YY54 714 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-204ENST00000430071 NDUFB6O95139 128 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 EGR2P11161 476 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms