RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 JPT1Q9UK76 154 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 RIF1Q5UIP0 2472 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 SRRM5B3KS81 715 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 VENTXO95231 258 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 TRIP6Q15654 476 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 PRAMEF5Q5TYX0 476 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 TMEM183AQ8IXX5 376 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 SARAFQ96BY9 339 aa11.04□□□□□ -0.64
SNRNP200-202ENST00000429650 TET2Q6N021 2002 aaPredicted RBP11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 TRAV38-1A0A0B4J264 116 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 PPP5D1E7EU14 171 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 M0R1X1 148 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 MZT1Q08AG7 82 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 CLEC12BQ2HXU8 276 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 IGFL2Q6UWQ7 119 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 PCGF1Q9BSM1 259 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 ZNF71Q9NQZ8 489 aaPredicted RBP11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 GFOD1Q9NXC2 390 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 CADP27708 2225 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 A0A1W2PPQ1 181 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 YPEL1O60688 119 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 TNFSF13O75888 250 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 LY86O95711 162 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 CD82P27701 267 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 EDDM3BP56851 147 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 MSMPQ1L6U9 139 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 TMEM249Q2WGJ8 235 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 OR4A16Q8NH70 328 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 RAB1CQ92928 201 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 YPEL2Q96QA6 119 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 FAM234AQ9H0X4 552 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 ASCL3Q9NQ33 180 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 DUSP13Q9UII6 198 aa11.03□□□□□ -0.64
SNRNP200-202ENST00000429650 TRAV17A0A0B4J275 112 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 MGST3O14880 152 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 TCAPO15273 167 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 IFNA10P01566 189 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 LOXL3P58215 753 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 GAMTQ14353 236 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 CR1LQ2VPA4 569 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 RPL39P5Q59GN2 51 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 VKORC1L1Q8N0U8 176 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 AKAP13Q12802 2813 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 IGHV3OR15-7A0A075B7D8 119 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 A0A1W2PN81 502 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 RRHO14718 337 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 RBFOX2O43251 390 aaKnown RBP eCLIP11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 GGCTO75223 188 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 IGHV3-13P01766 116 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 IGHV3-7P01780 117 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 CRYAAP02489 173 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 BMP5P22003 454 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 CHRNA7P36544 502 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 VDAC2P45880 294 aaPredicted RBP11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 ATP5G3P48201 142 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 ZNF134P52741 427 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 FAM3BP58499 235 aaPredicted RBP11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 GNB1P62873 340 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 TREML4Q6UXN2 200 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 BHLHA15Q7RTS1 189 aaPredicted RBP11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 OR1P1Q8NH06 330 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 OR52E5Q8NH55 327 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 STARD4Q96DR4 205 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 MEGF10Q96KG7 1140 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 DKK4Q9UBT3 224 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 RPH3ALQ9UNE2 315 aa11.02□□□□□ -0.65
SNRNP200-202ENST00000429650 PRSS46E5RG02 174 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 PDE6DO43924 150 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 SOX15O60248 233 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 MPDU1O75352 247 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 CGAP01215 116 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 WT1P19544 449 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 SRP14P37108 136 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 PRRX1P54821 245 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 UBE2G2P60604 165 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 PDLIM3Q53GG5 364 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 GCSAMQ8N6F7 178 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 OR2T10Q8NGZ9 312 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 IFI27L2Q9H2X8 130 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 HEYLQ9NQ87 328 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 PROCRQ9UNN8 238 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 SLC25A15Q9Y619 301 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 F2RL2O00254 374 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 OPRK1P41145 380 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 ERVK-16P61578 105 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 RELBQ01201 579 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 P2RY6Q15077 328 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 SPRNQ5BIV9 151 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 LINC01551Q86U37 167 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 OR5T1Q8NG75 326 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
SNRNP200-202ENST00000429650 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms