RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 OR2C1O95371 312 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 REG1AP05451 166 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 CTXN2P0C2S0 81 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 FOLR2P14207 255 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 PSMB9P28065 219 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 ARL3P36405 182 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 HSPA13P48723 471 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 HACD4Q5VWC8 232 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 CLEC19AQ6UXS0 136 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 LAX1Q8IWV1 398 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 VSTM2AQ8TAG5 236 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 LGALS14Q8TCE9 139 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 OR2A7Q96R45 310 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 GPHA2Q96T91 129 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 ZC4H2Q9NQZ6 224 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 DAPK2Q9UIK4 370 aa10.96□□□□□ -0.65
SDC1-204ENST00000429035 ZNF320A2RRD8 509 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 RBMY1BA6NDE4 496 aaKnown RBP10.95□□□□□ -0.66
SDC1-204ENST00000429035 RBMY1EA6NEQ0 496 aaKnown RBP10.95□□□□□ -0.66
SDC1-204ENST00000429035 NOTOA8MTQ0 251 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 SLC22A5O76082 557 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 HLA-DQB1P01920 261 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 RBMY1DP0C7P1 496 aaKnown RBP10.95□□□□□ -0.66
SDC1-204ENST00000429035 ARPC4P59998 168 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 DEFB114Q30KQ6 69 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 FAM209BQ5JX69 171 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 CNIH2Q6PI25 160 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 EEF1AKMT3Q96AZ1 226 aa10.95□□□□□ -0.66
SDC1-204ENST00000429035 HSD17B10Q99714 261 aaKnown RBP10.95□□□□□ -0.66
SDC1-204ENST00000429035 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 ZNF785A8K8V0 405 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 NPIPB5A8MRT5 1133 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 NDUFB8O95169 186 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 IL6RP08887 468 aaPredicted RBP10.94□□□□□ -0.66
SDC1-204ENST00000429035 DEFA4P12838 97 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 MYOD1P15172 320 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 AREGP15514 252 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 MECP2P51608 486 aaKnown RBP10.94□□□□□ -0.66
SDC1-204ENST00000429035 SLC16A13Q7RTY0 426 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 IL17DQ8TAD2 202 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 CCDC140Q96MF4 163 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 DCSTAMPQ9H295 470 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 HRASLSQ9HDD0 168 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 ANXA10Q9UJ72 324 aa10.94□□□□□ -0.66
SDC1-204ENST00000429035 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
SDC1-204ENST00000429035 E7EUB6 86 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 SCGNO76038 276 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 SCAF4O95104 1147 aaKnown RBP10.93□□□□□ -0.66
SDC1-204ENST00000429035 DHFRP00374 187 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 IGLV2-14P01704 120 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 FCER2P06734 321 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 KIR2DS2P43631 304 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 ZNF57Q68EA5 555 aaPredicted RBP10.93□□□□□ -0.66
SDC1-204ENST00000429035 BTNL8Q6UX41 500 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 PUSL1Q8N0Z8 303 aaKnown RBP10.93□□□□□ -0.66
SDC1-204ENST00000429035 MFSD4AQ8N468 514 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 OR52B4Q8NGK2 314 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 TMEM167AQ8TBQ9 72 aa10.93□□□□□ -0.66
SDC1-204ENST00000429035 TXNL4BQ9NX01 149 aaKnown RBP10.93□□□□□ -0.66
SDC1-204ENST00000429035 TECRQ9NZ01 308 aaKnown RBP10.93□□□□□ -0.66
SDC1-204ENST00000429035 A0A1B0GW64 132 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 SSX5O60225 188 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 HRASP01112 189 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 PTHLHP12272 177 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 PSMB6P28072 239 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 MAS1LP35410 378 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 FXYD4P59646 89 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 GABARAPL2P60520 117 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
SDC1-204ENST00000429035 MXD1Q05195 221 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 SFXN4Q6P4A7 337 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 LINC00322Q6ZN03 302 aaPredicted RBP10.92□□□□□ -0.66
SDC1-204ENST00000429035 ZNF66Q6ZN08 573 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 TMEM61Q8N0U2 210 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 OR13F1Q8NGS4 319 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 SLC2A9Q9NRM0 540 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 RHBDL2Q9NX52 303 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 SSR3Q9UNL2 185 aa10.92□□□□□ -0.66
SDC1-204ENST00000429035 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
SDC1-204ENST00000429035 TMEM213A2RRL7 107 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 MFSD2BA6NFX1 497 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 LGALS9O00182 355 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 ZNF735P0CB33 412 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 HLA-GP17693 338 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 GALP22466 123 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 CBLN1P23435 193 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 FCGR2CP31995 323 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 GPR183P32249 361 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 TIMM50Q3ZCQ8 353 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 FAM106AQ4KMX7 169 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 GVQW1Q8N7I0 195 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 BEST4Q8NFU0 473 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 CCL28Q9NRJ3 127 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 MLXQ9UH92 298 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 DMRT1Q9Y5R6 373 aa10.91□□□□□ -0.66
SDC1-204ENST00000429035 ALMS1Q8TCU4 4167 aa10.9□□□□□ -0.66
SDC1-204ENST00000429035 IGHV3-35A0A0C4DH35 117 aa10.9□□□□□ -0.66
SDC1-204ENST00000429035 SULT1C2O00338 296 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms