RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 GPHB5Q86YW7 130 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 RIBC1Q8N443 379 aaPredicted RBP0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 SLC22A24Q8N4F4 322 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 OR5L1Q8NGL2 311 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 ZNF75CPQ92670 426 aaPredicted RBP0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 TESCQ96BS2 214 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 PPCDCQ96CD2 204 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 SIKE1Q9BRV8 207 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 YIPF3Q9GZM5 350 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 RSL24D1Q9UHA3 163 aaKnown RBP0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 CFAP45Q9UL16 551 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 LHFPL6Q9Y693 200 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 SYNRGQ9UMZ2 1314 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 A0A1W2PP64 1363 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 TMEM94Q12767 1356 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 TNRC6BQ9UPQ9 1833 aaKnown RBP0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 RP1P56715 2156 aa0.26□□□□□ -2.37
CCDC144A-208ENST00000428950 TONSLQ96HA7 1378 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 A0A087WX48 190 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 TRBV10-2A0A0K0K1G8 114 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 ZNF879B4DU55 563 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 F8VZ95 297 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 APOMO95445 188 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 DEFA4P12838 97 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 CD40LGP29965 261 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 FXYD2P54710 66 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 RPS24P62847 133 aaKnown RBP0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 HLA-DRB3P79483 266 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 SMAGPQ0VAQ4 97 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 RASSF6Q6ZTQ3 369 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 ZNF565Q8N9K5 539 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 OR4C6Q8NH72 309 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 RAB2BQ8WUD1 216 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 ACOT12Q8WYK0 555 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 C19orf60Q96EN9 201 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 CCL13Q99616 98 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 MED10Q9BTT4 135 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 TMEM109Q9BVC6 243 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 SPANXB1Q9NS25 103 aaPredicted RBP0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 NAT8Q9UHE5 227 aa0.25□□□□□ -2.37
CCDC144A-208ENST00000428950 RALGAPA2Q2PPJ7 1873 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 COL4A5P29400 1685 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 GLI3P10071 1580 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 SETD5Q9C0A6 1442 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 RIMS2Q9UQ26 1411 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 TRAV14DV4A0A0A6YYC5 116 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 FUOMA2VDF0 154 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 MKRN2OSH3BPM6 223 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 SMLR1H3BR10 107 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 AZIN1O14977 448 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 PPBPP02775 128 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 SHBGP04278 402 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 RD3LP0DJH9 198 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 RNASE3P12724 160 aaKnown RBP0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 CXCL2P19875 107 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 GRPRP30550 384 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 HADHBP55084 474 aaKnown RBP0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 HLA-DRB5Q30154 266 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 SAPCD1Q5SSQ6 148 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 AADACL4Q5VUY2 407 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 CRLF3Q8IUI8 442 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 BOD1L2Q8IYS8 172 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 JOSD2Q8TAC2 188 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 ANKRD36BP1Q96IX9 119 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 PACRGQ96M98 296 aaPredicted RBP0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 OR52A5Q9H2C5 316 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 AK3Q9UIJ7 227 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 TP53TG1Q9Y2A0 90 aa0.24□□□□□ -2.37
CCDC144A-208ENST00000428950 FSIP2Q5CZC0 6907 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 ZFC3H1O60293 1989 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 EML6Q6ZMW3 1958 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 TNRC6AQ8NDV7 1962 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 TMEM269A0A1B0GVZ9 245 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 TMEM213A2RRL7 107 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 C21orf140B9A014 251 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 SLC22A1O15245 554 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 TOX3O15405 576 aaPredicted RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 NDUFS6O75380 124 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 PMP2P02689 132 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 UBBP0CG47 229 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 CCL5P13501 91 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 CXCL3P19876 107 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 CLDN12P56749 244 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 RPL30P62888 115 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 DMTNQ08495 405 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 ZNHIT3Q15649 155 aaPredicted RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 FAM27BQ5VT28 67 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 SPATA24Q86W54 205 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 C1orf158Q8N1D5 194 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 TBC1D19Q8N5T2 526 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 ZNF676Q8N7Q3 588 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 GNPNAT1Q96EK6 184 aaPredicted RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 TIPINQ9BVW5 301 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 SLC22A4Q9H015 551 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 NSRP1Q9H0G5 558 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 PRELID1Q9Y255 219 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 ALPK2Q86TB3 2170 aa0.23□□□□□ -2.37
CCDC144A-208ENST00000428950 LOC110117498A0A087WWA1 95 aa0.22□□□□□ -2.37
CCDC144A-208ENST00000428950 TRBV6-7A0A0A0MS04 114 aa0.22□□□□□ -2.37
CCDC144A-208ENST00000428950 TMED7-TICAM2A0A0A6YYA0 188 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms