RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR52E5Q8NH55 327 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 RAB40CQ96S21 281 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 TSNAXQ99598 290 aaKnown RBP10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 MAGT1Q9H0U3 335 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 PRNDQ9UKY0 176 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 HSPB11Q9Y547 144 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 TNCP24821 2201 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 CREBBPQ92793 2442 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 A0A0D9SG52 128 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 C15orf61A6NNL5 157 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 CHST1O43916 411 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 SSSCA1O60232 199 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 KBTBD11O94819 623 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR2F2O95006 317 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 NXPH3O95157 252 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 MOSP00540 346 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 FGF2P09038 288 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 SAA1P0DJI8 122 aaPredicted RBP10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 CXCL2P19875 107 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 BRS3P32247 399 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 P2RY1P47900 373 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 BPIFB3P59826 476 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 VAMP2P63027 116 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR2F1Q13607 317 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 EBI3Q14213 229 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 ZNF345Q14585 488 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 TEX45Q8NA69 505 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR2T10Q8NGZ9 312 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 TMEM167AQ8TBQ9 72 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 C17orf50Q8WW18 174 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 C11orf1Q9H5F2 150 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 TMEM14BQ9NUH8 114 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 FKBP11Q9NYL4 201 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 FOXA2Q9Y261 457 aaPredicted RBP10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 FLNAP21333 2647 aaKnown RBP10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
HMGB3P4-201ENST00000428776 TRAV3A0A0B4J244 114 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 GPR137BO60478 399 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 SPDEFO95238 335 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 LY86O95711 162 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 AVPP01185 164 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 IGHV4-38-2P0DP08 117 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 TAS2R30P59541 319 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 SPCS3P61009 180 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 PSG5Q15238 335 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 PDLIM3Q53GG5 364 aaPredicted RBP10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 THNSL2Q86YJ6 484 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 KCNRGQ8N5I3 272 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 RITA1Q96K30 269 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 SMIM8Q96KF7 97 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 AQP10Q96PS8 301 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 QTRT1Q9BXR0 403 aaKnown RBP10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 RBKSQ9H477 322 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 ZNF257Q9Y2Q1 563 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 WSB1Q9Y6I7 421 aa10.21□□□□□ -0.77
HMGB3P4-201ENST00000428776 ABCA1O95477 2261 aa10.21□□□□□ -0.78
HMGB3P4-201ENST00000428776 IGHV3OR16-10A0A075B7F0 116 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 RNF222A6NCQ9 220 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 SLC25A17O43808 307 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 IFNA17P01571 189 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 IGKV1D-33P01593 117 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 IGKV1-33P01594 117 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 CRYGBP07316 175 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 SNRNP70P08621 437 aaKnown RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 FAM106CPP0CH98 169 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 RPL12P30050 165 aaKnown RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 S100A11P31949 105 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 OR2B8PP59922 312 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 RPL23AP62750 156 aaKnown RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 RUSC1-AS1Q66K80 236 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 BRD3OSQ6XYD6 125 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 TMUB2Q71RG4 321 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 OR2C3Q8N628 320 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 EAF1Q96JC9 268 aaPredicted RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 CIB3Q96Q77 187 aaPredicted RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 MEGF9Q9H1U4 602 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 PLSCR3Q9NRY6 295 aa10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 LYRM2Q9NU23 88 aaPredicted RBP10.2□□□□□ -0.78
HMGB3P4-201ENST00000428776 CELSR1Q9NYQ6 3014 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 CEBPZOSA8MTT3 80 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 KCNAB3O43448 404 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 TMEM50AO95807 157 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 HKR1P10072 659 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 PAX6P26367 422 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 MAS1LP35410 378 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 DYNLT3P51808 116 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 PAX9P55771 341 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 RPL8P62917 257 aaKnown RBP10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 HES1Q14469 280 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 CIARTQ8N365 385 aaPredicted RBP10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 Q8N6K4 173 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 NPBQ8NG41 125 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 OR5B3Q8NH48 314 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 DTD1Q8TEA8 209 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 SLC25A31Q9H0C2 315 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms