RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 UNQ5815/PRO19632Q6UWF5 114 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 ADAD2Q8NCV1 583 aaKnown RBP11.46□□□□□ -0.57
SGCE-204ENST00000428696 LFNGQ8NES3 379 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 CITED1Q99966 193 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 RTBDNQ9BSG5 229 aaPredicted RBP11.46□□□□□ -0.57
SGCE-204ENST00000428696 PLEKHA2Q9HB19 425 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 ZNF355PQ9NSJ1 428 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 SLC2A8Q9NY64 477 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 ARPC1BO15143 372 aaKnown RBP11.45□□□□□ -0.58
SGCE-204ENST00000428696 CREBL2O60519 120 aaPredicted RBP11.45□□□□□ -0.58
SGCE-204ENST00000428696 PF4V1P10720 104 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 RND3P61587 244 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 NDPQ00604 133 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 SURF2Q15527 256 aaPredicted RBP11.45□□□□□ -0.58
SGCE-204ENST00000428696 ZNF585BQ52M93 769 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 LINC00299Q6ZSB3 139 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 MMD2Q8IY49 270 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 OR5T1Q8NG75 326 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
SGCE-204ENST00000428696 FYTTD1Q96QD9 318 aaKnown RBP11.45□□□□□ -0.58
SGCE-204ENST00000428696 TP53RKQ96S44 253 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 WDR12Q9GZL7 423 aaKnown RBP11.45□□□□□ -0.58
SGCE-204ENST00000428696 C5orf66Q9H5L9 145 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 TMEM140Q9NV12 185 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 GPR132Q9UNW8 380 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 VSIG4Q9Y279 399 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 FBXO7Q9Y3I1 522 aa11.45□□□□□ -0.58
SGCE-204ENST00000428696 A0A1W2PN81 502 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 RBMXL2O75526 392 aaKnown RBP11.44□□□□□ -0.58
SGCE-204ENST00000428696 SNAPC5O75971 98 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 KBTBD11O94819 623 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 IGF1P05019 195 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 CD40LGP29965 261 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 CHRNA7P36544 502 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 TEX38Q6PEX7 206 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 LCNL1Q6ZST4 164 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 SGPP2Q8IWX5 399 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 CASTOR1Q8WTX7 329 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 NAA60Q9H7X0 242 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 COMMD9Q9P000 198 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 KCNIP3Q9Y2W7 256 aa11.44□□□□□ -0.58
SGCE-204ENST00000428696 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 NAP1L6A6NFF2 107 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 MARCH11A6NNE9 402 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 H0Y980 276 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 EGR2P11161 476 aaPredicted RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 RPL8P62917 257 aaKnown RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 CXorf66Q5JRM2 361 aaPredicted RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 C10orf55Q5SWW7 151 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 H2BFWTQ7Z2G1 175 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 TMEM167AQ8TBQ9 72 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 MS4A10Q96PG2 267 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 SLC25A21Q9BQT8 299 aaPredicted RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 CCDC32Q9BV29 185 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 HINT2Q9BX68 163 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 NSG2Q9Y328 171 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 M0QZ24 198 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 UPK2O00526 184 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 MYOD1P15172 320 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 HLA-GP17693 338 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 AKR1C2P52895 323 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 TCTEX1D4Q5JR98 221 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 PUSL1Q8N0Z8 303 aaKnown RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 FAM110DQ8TAY7 271 aaPredicted RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 SRSF12Q8WXF0 261 aaKnown RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 DEDD2Q8WXF8 326 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 PRR13Q9NZ81 148 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
SGCE-204ENST00000428696 NUBP2Q9Y5Y2 271 aa11.43□□□□□ -0.58
SGCE-204ENST00000428696 HMX3A6NHT5 357 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 RPLP1P05386 114 aaKnown RBP11.42□□□□□ -0.58
SGCE-204ENST00000428696 VAMP1P23763 118 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 RPL27AP46776 148 aaKnown RBP11.42□□□□□ -0.58
SGCE-204ENST00000428696 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 ZNF695Q8IW36 515 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 RRNAD1Q96FB5 475 aaKnown RBP11.42□□□□□ -0.58
SGCE-204ENST00000428696 SPIN2AQ99865 258 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 SPIN2BQ9BPZ2 258 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 COMMD5Q9GZQ3 224 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 COA4Q9NYJ1 87 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
SGCE-204ENST00000428696 TSSC4Q9Y5U2 329 aaPredicted RBP11.42□□□□□ -0.58
SGCE-204ENST00000428696 PLA2G10O15496 165 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 LYRM1O43325 122 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 ATG12O94817 140 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 OR2B8PP59922 312 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 CD83Q01151 205 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 FOXE3Q13461 319 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 RBMS2Q15434 407 aaKnown RBP11.41□□□□□ -0.58
SGCE-204ENST00000428696 IZUMO4Q1ZYL8 232 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 AKIRIN2Q53H80 203 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 OR5B12Q96R08 314 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms