RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ANKRD65E5RJM6 399 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 HLA-DQB1P01920 261 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 IL6RP08887 468 aaPredicted RBP12.41□□□□□ -0.42
VARS-216ENST00000428445 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
VARS-216ENST00000428445 CLEC19AQ6UXS0 136 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 VSTM2AQ8TAG5 236 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 NRG4Q8WWG1 115 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 FYTTD1Q96QD9 318 aaKnown RBP12.41□□□□□ -0.42
VARS-216ENST00000428445 NDUFB11Q9NX14 153 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 OR2W1Q9Y3N9 320 aa12.41□□□□□ -0.42
VARS-216ENST00000428445 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 GGCTO75223 188 aaKnown RBP12.4□□□□□ -0.42
VARS-216ENST00000428445 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.42
VARS-216ENST00000428445 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 CD36P16671 472 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 CBLN1P23435 193 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 CDNFQ49AH0 187 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 HACD4Q5VWC8 232 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 CNIH2Q6PI25 160 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 TMEM61Q8N0U2 210 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 CCDC140Q96MF4 163 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 FANCD2OSQ96PS1 177 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 ST6GALNAC5Q9BVH7 336 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 ATG5Q9H1Y0 275 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 OR51E2Q9H255 320 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 MLXQ9UH92 298 aa12.4□□□□□ -0.42
VARS-216ENST00000428445 MRPS7Q9Y2R9 242 aaKnown RBP12.4□□□□□ -0.42
VARS-216ENST00000428445 ZNF320A2RRD8 509 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 REG1AP05451 166 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 AREGP15514 252 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 MAS1LP35410 378 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
VARS-216ENST00000428445 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
VARS-216ENST00000428445 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 AIFM2Q9BRQ8 373 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 KRTAP17-1Q9BYP8 105 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 TECRQ9NZ01 308 aaKnown RBP12.39□□□□□ -0.43
VARS-216ENST00000428445 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
VARS-216ENST00000428445 TMEM213A2RRL7 107 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 LGALS9O00182 355 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 FGF9P31371 208 aaPredicted RBP12.38□□□□□ -0.43
VARS-216ENST00000428445 ARL3P36405 182 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 KLK9Q2XQG4 91 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 TM4SF20Q53R12 229 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 TPRA1Q86W33 373 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 NR2C2APQ86WQ0 139 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 UXS1Q8NBZ7 420 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 KLK9Q9UKQ9 250 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 SPATA2Q9UM82 520 aa12.38□□□□□ -0.43
VARS-216ENST00000428445 RBMX2Q9Y388 322 aaKnown RBP12.38□□□□□ -0.43
VARS-216ENST00000428445 NOTOA8MTQ0 251 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 LY6G6CO95867 125 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 DHFRP00374 187 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 RPL27AP46776 148 aaKnown RBP12.37□□□□□ -0.43
VARS-216ENST00000428445 MSMO1Q15800 293 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
VARS-216ENST00000428445 ZNF66Q6ZN08 573 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 GPHB5Q86YW7 130 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 OR52B4Q8NGK2 314 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 OR2A7Q96R45 310 aa12.37□□□□□ -0.43
VARS-216ENST00000428445 IGHV3-35A0A0C4DH35 117 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 DPPA5A6NC42 116 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 CGB1A6NKQ9 187 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 KBTBD11O94819 623 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 BTNL8Q6UX41 500 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 PUSL1Q8N0Z8 303 aaKnown RBP12.36□□□□□ -0.43
VARS-216ENST00000428445 TMEM167AQ8TBQ9 72 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 SLC2A9Q9NRM0 540 aa12.36□□□□□ -0.43
VARS-216ENST00000428445 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 HRASP01112 189 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 CRYGCP07315 174 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 ZNF735P0CB33 412 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 PTHLHP12272 177 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 HIST1H1BP16401 226 aaKnown RBP12.35□□□□□ -0.43
VARS-216ENST00000428445 PSMB6P28072 239 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 SCAND1P57086 179 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 GABARAPL2P60520 117 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 EIF4EBP1Q13541 118 aaPredicted RBP12.35□□□□□ -0.43
VARS-216ENST00000428445 C22orf42Q6IC83 251 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 SLC16A13Q7RTY0 426 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 ZBTB34Q8NCN2 500 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 GGTLC1Q9BX51 225 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 TAS2R8Q9NYW2 309 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 ANXA10Q9UJ72 324 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 RAB26Q9ULW5 256 aa12.35□□□□□ -0.43
VARS-216ENST00000428445 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
VARS-216ENST00000428445 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms