RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TECRQ9NZ01 308 aaKnown RBP13.43□□□□□ -0.26
C9orf3-206ENST00000428313 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 PSG11Q9UQ72 335 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 HTTP42858 3142 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 TRAPPC2LH3BP13 241 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 J3QW42 95 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 K7EP34 96 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 HSPB6O14558 160 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 RAB30Q15771 203 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 CENPWQ5EE01 88 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 C16orf47Q6ZP98 133 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-206ENST00000428313 CRIM1Q9NZV1 1036 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 OR1A1Q9P1Q5 309 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 FAM231BA6NCW3 169 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 OTX2P32243 289 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 PMCHL2Q9BQD1 86 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 KCNS2Q9ULS6 477 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 GNG7O60262 68 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 HAND1O96004 215 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 SRFP11831 508 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 FAM69BQ5VUD6 431 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 RNASEKQ6P5S7 137 aaKnown RBP13.42□□□□□ -0.26
C9orf3-206ENST00000428313 WFDC12Q8WWY7 111 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 TMEM191AQ9H0A3 160 aa13.42□□□□□ -0.26
C9orf3-206ENST00000428313 C9orf118A6NHY6 69 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 WISP2O76076 250 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 FBLP22087 321 aaKnown RBP13.41□□□□□ -0.26
C9orf3-206ENST00000428313 GPR183P32249 361 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 SLC35B1P78383 322 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 SCGB2A2Q13296 93 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 KIR3DL3Q8N743 410 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 HS3ST6Q96QI5 342 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 NPVFQ9HCQ7 196 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 ZNF835Q9Y2P0 537 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 HELTA6NFD8 242 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 SYS1-DBNDD2H3BUS1 97 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 OR2J3O76001 311 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 TCL1AP56279 114 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 TIGITQ495A1 244 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 MOB1BQ7L9L4 216 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 AP1S3Q96PC3 154 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 ATP6V0BQ99437 205 aa13.41□□□□□ -0.26
C9orf3-206ENST00000428313 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
C9orf3-206ENST00000428313 hDV102S1A0JD36 115 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 H3BRM9 83 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 GTF3C1Q12789 2109 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 Q5PR19 223 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 SPATA46Q5T0L3 261 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 IL1F10Q8WWZ1 152 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 IL36RNQ9UBH0 155 aa13.4□□□□□ -0.26
C9orf3-206ENST00000428313 PPIAL4EA0A075B759 164 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 PPIAL4CA0A0B4J2A2 164 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 IGHV5-51A0A0C4DH38 117 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 PPIAL4DF5H284 164 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 NPIPA3F8WFD2 350 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 RAB29O14966 203 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 PPIAL4FP0DN26 164 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 RPS16P62249 146 aaKnown RBP13.39□□□□□ -0.27
C9orf3-206ENST00000428313 PDLIM3Q53GG5 364 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-206ENST00000428313 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-206ENST00000428313 SLC35E4Q6ICL7 350 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 TMEM108Q6UXF1 575 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 MKXQ8IYA7 352 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 SLC22A18ASQ8N1D0 253 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 OR13H1Q8NG92 308 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 OR5A1Q8NGJ0 315 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 A6NJY4 79 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 G6PCP35575 357 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 FXYD3Q14802 87 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 TMEM92Q6UXU6 159 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 PQLC2Q6ZP29 291 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 DOLPP1Q86YN1 238 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 ZBTB34Q8NCN2 500 aa13.39□□□□□ -0.27
C9orf3-206ENST00000428313 CLDN14O95500 239 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 IBA57Q5T440 356 aaKnown RBP13.38□□□□□ -0.27
C9orf3-206ENST00000428313 SYT13Q7L8C5 426 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 OR2T6Q8NHC8 308 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 FNDC4Q9H6D8 234 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-206ENST00000428313 DEPPQ9NTK1 212 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 CLEC5AQ9NY25 188 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 A0A087X0K7 114 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 HBZP02008 142 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 AZU1P20160 251 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 SIGMAR1Q99720 223 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 PRDM6Q9NQX0 595 aa13.38□□□□□ -0.27
C9orf3-206ENST00000428313 GOSR1O95249 250 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 SP9P0CG40 484 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 ZNF32P17041 273 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 COL9A1P20849 921 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 ZNF542PQ5EBM4 170 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 TREML4Q6UXN2 200 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms