RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 BORCS8Q96FH0 119 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 DNAJC5Q9H3Z4 198 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PTGDSP41222 190 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 DEFB128Q7Z7B8 93 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 METTL27Q8N6F8 245 aaPredicted RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF596Q8TC21 504 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 F2Z2F3 143 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 LMO7DNF2Z398 122 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 CD5LO43866 347 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PRSS57Q6UWY2 283 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 TMEM136Q6ZRR5 245 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 C7orf61Q8IZ16 206 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PATZ1Q9HBE1 687 aaKnown RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 LIN7CQ9NUP9 197 aaKnown RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 PLA2G3Q9NZ20 509 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 C15orf62A8K5M9 175 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 CA2P00918 260 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 OPRK1P41145 380 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 GUCA1AP43080 201 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 SPANXN5Q5MJ07 72 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 TCF23Q7RTU1 214 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 TMEM54Q969K7 222 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 COMMD5Q9GZQ3 224 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 PSENENQ9NZ42 101 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 MMP17Q9ULZ9 603 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 USP24Q9UPU5 2620 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 SNURFLB1AK76 121 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 H3BML4 177 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 NPY1RP25929 384 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 MNX1P50219 401 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 PSRC1Q6PGN9 363 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 BRICD5Q6PL45 260 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 DYRK2Q92630 601 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 RCHY1Q96PM5 261 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 GGTLC1Q9BX51 225 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 SAMD10Q9BYL1 202 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 ITPR2Q14571 2701 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 RAC3P60763 192 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 SPATA45Q537H7 98 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 Q6ZSR6 202 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 EAF1Q96JC9 268 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 CLEC1BQ9P126 229 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 PPIAL4AQ9Y536 164 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 NOTCH2Q04721 2471 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 TUBG1P23258 451 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 BRWD1-AS2P59051 145 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 BVES-AS1Q5T3Y7 98 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 PRR27Q6MZM9 219 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 OR52E5Q8NH55 327 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 RDH5Q92781 318 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 SAP30LQ9HAJ7 183 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 TOX4O94842 621 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 JMJD7P0C870 316 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 ZNF16P17020 682 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 CCR5P51681 352 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 HYAL1Q12794 435 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 ZNF146Q15072 292 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 FAM231DQ6ZW35 169 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 OR1F12Q8NHA8 337 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 LOXL4Q96JB6 756 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 OR5AL1P0C617 328 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 NTF4P34130 210 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 THBS3P49746 956 aa4.29□□□□□ -1.72
RIF1-203ENST00000428287 KLF5Q13887 457 aaPredicted RBP4.29□□□□□ -1.72
RIF1-203ENST00000428287 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 CLRN1P58418 232 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 LCN12Q6JVE5 192 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 BATF2Q8N1L9 274 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 C1orf159Q96HA4 380 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 PGPEP1LA6NFU8 196 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 ATXN8OSP0DMR3 200 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 GLB1P16278 677 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 PSG9Q00887 426 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 HLA-DQA1Q5Y7H0 255 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 MOB1BQ7L9L4 216 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 BAGE3Q86Y29 109 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 MMD2Q8IY49 270 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 CYC1P08574 325 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 GABRA2P47869 451 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 SEC11AP67812 179 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 PSG7Q13046 419 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 OR10P1Q8NGE3 313 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 NEU4Q8WWR8 484 aaPredicted RBP4.28□□□□□ -1.72
RIF1-203ENST00000428287 ZNF442Q9H7R0 627 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 ERRFI1Q9UJM3 462 aaPredicted RBP4.28□□□□□ -1.72
RIF1-203ENST00000428287 ZNF835Q9Y2P0 537 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 FAM216AQ8WUB2 273 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 NEUROG1Q92886 237 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 FGF23Q9GZV9 251 aaPredicted RBP4.28□□□□□ -1.72
RIF1-203ENST00000428287 TUBG2Q9NRH3 451 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 A0A1B0GXF2 115 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 FAM90A9PA6NNJ1 464 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 G3V4G9 280 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 K7EN84 100 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 AQP7O14520 342 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 EGR1P18146 543 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms