RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FYTTD1Q96QD9 318 aaKnown RBP14.05□□□□□ -0.16
PSPC1-202ENST00000427943 TRBV9A0A0B4J1U6 114 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 E7EUB6 86 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 XRCC3O43542 346 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 TMEM127O75204 238 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 OR2J3O76001 311 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 MYOD1P15172 320 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 KIR2DS2P43631 304 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 TAS2R20P59543 309 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 ATP5G2Q06055 141 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 IL34Q6ZMJ4 242 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 SPAG16Q8N0X2 631 aa14.04□□□□□ -0.16
PSPC1-202ENST00000427943 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
PSPC1-202ENST00000427943 STAB2Q8WWQ8 2551 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 A0A1B0GW64 132 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 BMPR1BO00238 502 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 SULT1C2O00338 296 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 HRASP01112 189 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 IL6RP08887 468 aaPredicted RBP14.03□□□□□ -0.16
PSPC1-202ENST00000427943 MSMO1Q15800 293 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 TMEM69Q5SWH9 247 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 ZNF818PQ6ZRF7 136 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 SLC25A42Q86VD7 318 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 EHFQ9NZC4 300 aa14.03□□□□□ -0.16
PSPC1-202ENST00000427943 DPPA5A6NC42 116 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 CSN3P07498 182 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 AREGP15514 252 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 MAS1LP35410 378 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 HERV-K104P61576 105 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 CATR1Q13166 79 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 C15orf32Q32M92 178 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 OR4A47Q6IF82 309 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 OR51H1Q8NH63 302 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 ZNF257Q9Y2Q1 563 aa14.02□□□□□ -0.17
PSPC1-202ENST00000427943 REG1AP05451 166 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 ZNF735P0CB33 412 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 NCS1P62166 190 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 RPL8P62917 257 aaKnown RBP14.01□□□□□ -0.17
PSPC1-202ENST00000427943 TATDN3Q17R31 274 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 Q8N1Y9 231 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 NECAP1Q8NC96 275 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 GIMAP1Q8WWP7 306 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 RCHY1Q96PM5 261 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 HRASLSQ9HDD0 168 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 SLC2A9Q9NRM0 540 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 FBXL7Q9UJT9 491 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 S4R3C0 116 aa14.01□□□□□ -0.17
PSPC1-202ENST00000427943 NBEAL2Q6ZNJ1 2754 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14□□□□□ -0.17
PSPC1-202ENST00000427943 CGB1A6NKQ9 187 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 NPIPB5A8MRT5 1133 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 PPP5D1E7EU14 171 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 IGHV3-23P01764 117 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 PMP2P02689 132 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 EIF4EP06730 217 aaKnown RBP14□□□□□ -0.17
PSPC1-202ENST00000427943 IGHV4-30-4P0DP06 118 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 RFX2P48378 723 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 AADACL3Q5VUY0 350 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 SLC25A46Q96AG3 418 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 FUNDC2Q9BWH2 189 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 BET1LQ9NYM9 111 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 ANAPC10Q9UM13 185 aa14□□□□□ -0.17
PSPC1-202ENST00000427943 TRAV3A0A0B4J244 114 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 RBFOX2O43251 390 aaKnown RBP eCLIP13.99□□□□□ -0.17
PSPC1-202ENST00000427943 S1PR2O95136 353 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 NDUFB8O95169 186 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 HLA-AP01891 365 aaKnown RBP13.99□□□□□ -0.17
PSPC1-202ENST00000427943 RPA2P15927 270 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 HLA-GP17693 338 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 GNRHRP30968 328 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 VBP1P61758 197 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 SGPP2Q8IWX5 399 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 OR5H2Q8NGV7 314 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 OR4A5Q8NH83 315 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 FANCD2OSQ96PS1 177 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 ZNF2Q9BSG1 426 aaPredicted RBP13.99□□□□□ -0.17
PSPC1-202ENST00000427943 COMMD3Q9UBI1 195 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 PEMTQ9UBM1 199 aa13.99□□□□□ -0.17
PSPC1-202ENST00000427943 IZUMO1RA6ND01 250 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 H0Y980 276 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 HPRT1P00492 218 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 RLN1P04808 185 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 NQO2P16083 231 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 EDN2P20800 178 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 PSMB6P28072 239 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 TAS2R31P59538 309 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 LCN12Q6JVE5 192 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 FXYD6Q9H0Q3 95 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 SIGLEC8Q9NYZ4 499 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
PSPC1-202ENST00000427943 KMT2CQ8NEZ4 4911 aaKnown RBP13.97□□□□□ -0.17
PSPC1-202ENST00000427943 CRYGCP07315 174 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 CTRB1P17538 263 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 PRSS3P35030 304 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 TAS2R46P59540 309 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 CTRB2Q6GPI1 263 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 DMBX1Q8NFW5 382 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 MOB3AQ96BX8 217 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 KCTD12Q96CX2 325 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms