RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 FAM27BQ5VT28 67 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 Q6ZT83 130 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 SPNS2Q8IVW8 549 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 RCC1LQ96I51 464 aaKnown RBP4.9□□□□□ -1.63
HERC4-206ENST00000427635 SPSB2Q99619 263 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 IL36RNQ9UBH0 155 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 ZNF638Q14966 1978 aaKnown RBP4.9□□□□□ -1.63
HERC4-206ENST00000427635 GAGE10A6NGK3 116 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 ADARB2-AS1A8MUL3 147 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 SSTR5P35346 364 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 SLC25A45Q8N413 288 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 OR52E5Q8NH55 327 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 MRAPQ8TCY5 172 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 RSPO3Q9BXY4 272 aaPredicted RBP4.9□□□□□ -1.63
HERC4-206ENST00000427635 TSPAN13O95857 204 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 CA2P00918 260 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 HOXD3P31249 432 aaPredicted RBP4.9□□□□□ -1.63
HERC4-206ENST00000427635 GLRXP35754 106 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
HERC4-206ENST00000427635 COL5A1-AS1Q5SY13 56 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 SMIM4Q8WVI0 70 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 HIST1H4GQ99525 98 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 CSTL1Q9H114 145 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 SLC35B3Q9H1N7 401 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 ZNF385DQ9H6B1 395 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 TMEM250H0YL14 139 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 RPL35AP18077 110 aaKnown RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 DDTP30046 118 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 LIMS1P48059 325 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 EVX1P49640 407 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ZP1P60852 638 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 RPL32P62910 135 aaKnown RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 UNC119Q13432 240 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 LINC00303Q3SY05 128 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ZNF818PQ6ZRF7 136 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ZNF826PQ6ZT77 177 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 TCF24Q7RTU0 167 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 RMI2Q96E14 147 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 LRRC3BQ96PB8 259 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 NAA50Q9GZZ1 169 aaKnown RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 SLC25A37Q9NYZ2 338 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 KLK13Q9UKR3 277 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 GON4LQ3T8J9 2241 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 CXorf65A6NEN9 183 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 B4DSR2 109 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 PAGE4O60829 102 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 IGHV3-11P01762 117 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 IL4P05112 153 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 PLP1P60201 277 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ZNF146Q15072 292 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 OR5AU1Q8NGC0 362 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 SLC25A38Q96DW6 304 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 MS4A3Q96HJ5 214 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 FOXC2Q99958 501 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 SS18L2Q9UHA2 77 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ITGB4P16144 1822 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ECM29Q5VYK3 1845 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 A0A087WX48 190 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 TRAV8-6A0A0B4J262 113 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 RBFOX3A6NFN3 312 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 PLPP2O43688 288 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 PRSS23O95084 383 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 C1QBP02746 253 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 AMY1AP04745 511 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 MFAP2P55001 183 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 RPL24P83731 157 aaKnown RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 PPP1R1AQ13522 171 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 C12orf73Q69YU5 71 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 SLC22A18ASQ8N1D0 253 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 DLX4Q92988 240 aaPredicted RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 KCNS1Q96KK3 526 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 PGLYRP4Q96LB8 373 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 TRAV40A0A0B4J280 105 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 CTXND1A0A1B0GTU2 59 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 GPR183P32249 361 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 GPX4P36969 197 aaPredicted RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 PTGDSP41222 190 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 MEF2CQ06413 473 aaPredicted RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 GAGE1Q13065 139 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 TTC9CQ8N5M4 171 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 ADAT3Q96EY9 351 aaPredicted RBP4.89□□□□□ -1.63
HERC4-206ENST00000427635 SCN7AQ01118 1682 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 S100A7L2Q5SY68 101 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 DNAJC4Q9NNZ3 241 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 FLRT3Q9NZU0 649 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 PKIGQ9Y2B9 76 aa4.89□□□□□ -1.63
HERC4-206ENST00000427635 LAMB1P07942 1786 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 SOCS1O15524 211 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 NGFRP08138 427 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 C5orf64Q2M2E5 130 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 MRPL32Q9BYC8 188 aaKnown RBP4.88□□□□□ -1.63
HERC4-206ENST00000427635 NHSL1Q5SYE7 1610 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 ALS2Q96Q42 1657 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 ASPDHA6ND91 283 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 MOSPD3O75425 235 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 LYL1P12980 280 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 GCAP28676 217 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms