RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CASTOR1Q8WTX7 329 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 OR2A7Q96R45 310 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 NPFFR1Q9GZQ6 430 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.45
COL11A1-204ENST00000427239 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 FAM181BA6NEQ2 426 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 CRYBA1P05813 215 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 CRYGBP07316 175 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 SAA1P0DJI8 122 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-204ENST00000427239 G6PCP35575 357 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 TMEM268Q5VZI3 342 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 SELENOHQ8IZQ5 122 aaKnown RBP12.26□□□□□ -0.45
COL11A1-204ENST00000427239 PUSL1Q8N0Z8 303 aaKnown RBP12.26□□□□□ -0.45
COL11A1-204ENST00000427239 OR4A5Q8NH83 315 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 ZNF431Q8TF32 576 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-204ENST00000427239 MITD1Q8WV92 249 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
COL11A1-204ENST00000427239 PHB2Q99623 299 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 FBXL15Q9H469 300 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 BET1LQ9NYM9 111 aa12.26□□□□□ -0.45
COL11A1-204ENST00000427239 A0A0B4J2A0 478 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 DUXBA0A1W2PPF3 345 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 SNRPGP15A8MWD9 76 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 CREBL2O60519 120 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-204ENST00000427239 AMY1AP04745 511 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 IL6RP08887 468 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-204ENST00000427239 FGF2P09038 288 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 ANKRD55Q3KP44 614 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 OR4A47Q6IF82 309 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 SSX9Q7RTT3 188 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 LURAP1LQ8IV03 231 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 FAM219AQ8IW50 185 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 SHPKQ9UHJ6 478 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 KBTBD11O94819 623 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 HLA-DRB1P01911 266 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 VDAC1P21796 283 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 AKR1C2P52895 323 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 TMEM167AQ8TBQ9 72 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 LSM10Q969L4 123 aaKnown RBP12.25□□□□□ -0.45
COL11A1-204ENST00000427239 TMEM140Q9NV12 185 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 MMP24Q9Y5R2 645 aa12.25□□□□□ -0.45
COL11A1-204ENST00000427239 BLCAPP62952 87 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 ZNF562Q6V9R5 426 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 MMD2Q8IY49 270 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 SLC35G3Q8N808 338 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 OR52B4Q8NGK2 314 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 SEC22CQ9BRL7 303 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 PRSS22Q9GZN4 317 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 RANBP3Q9H6Z4 567 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-204ENST00000427239 PRR13Q9NZ81 148 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 TMED3Q9Y3Q3 217 aa12.24□□□□□ -0.45
COL11A1-204ENST00000427239 CCNKO75909 580 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 PRSS8Q16651 343 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 TATDN3Q17R31 274 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 LYZL2Q7Z4W2 148 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-204ENST00000427239 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
COL11A1-204ENST00000427239 UPK2O00526 184 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 FCN1O00602 326 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 SNAPC5O75971 98 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 ACTL6BO94805 426 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 P0C879 139 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 MAS1LP35410 378 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 RPL8P62917 257 aaKnown RBP12.23□□□□□ -0.45
COL11A1-204ENST00000427239 ZNF430Q9H8G1 570 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-204ENST00000427239 FKBP11Q9NYL4 201 aa12.23□□□□□ -0.45
COL11A1-204ENST00000427239 TSPAN9O75954 239 aa12.22□□□□□ -0.45
COL11A1-204ENST00000427239 PJVKQ0ZLH3 352 aa12.22□□□□□ -0.45
COL11A1-204ENST00000427239 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
COL11A1-204ENST00000427239 TPSG1Q9NRR2 321 aa12.22□□□□□ -0.45
COL11A1-204ENST00000427239 C7orf66A4D0T2 115 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 KCNAB3O43448 404 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 IFNA21P01568 189 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 IGHG2P01859 326 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 CX3CL1P78423 397 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 RELBQ01201 579 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 MRGPRG-AS1Q2M3A8 158 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 NMSQ5H8A3 153 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 Q8N2B8 174 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 UXS1Q8NBZ7 420 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 OR4A16Q8NH70 328 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 CACFD1Q9UGQ2 172 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 PRNDQ9UKY0 176 aa12.21□□□□□ -0.45
COL11A1-204ENST00000427239 A0A1B0GU03 582 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 CNIH1O95406 144 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 CA2P00918 260 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 HOXB5P09067 269 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 HLA-GP17693 338 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-204ENST00000427239 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-204ENST00000427239 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 COA4Q9NYJ1 87 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms