RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 SPIN2AQ99865 258 aa13.36□□□□□ -0.27
LMCD1-204ENST00000426878 SPIN2BQ9BPZ2 258 aa13.36□□□□□ -0.27
LMCD1-204ENST00000426878 PLEKHA2Q9HB19 425 aa13.36□□□□□ -0.27
LMCD1-204ENST00000426878 GPR31O00270 319 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 LGALS1P09382 135 aaKnown RBP13.35□□□□□ -0.27
LMCD1-204ENST00000426878 TPPP2P59282 170 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 ZNF616Q08AN1 781 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 AADACL3Q5VUY0 350 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 FOXB2Q5VYV0 432 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 OR51H1Q8NH63 302 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 OR4A5Q8NH83 315 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 MS4A10Q96PG2 267 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 NXF2Q9GZY0 626 aaKnown RBP13.35□□□□□ -0.27
LMCD1-204ENST00000426878 BET1LQ9NYM9 111 aa13.35□□□□□ -0.27
LMCD1-204ENST00000426878 CTDSPLO15194 276 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 TRGV3P03979 118 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 IL6RP08887 468 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-204ENST00000426878 FGF2P09038 288 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 OR8U8P0C7N1 319 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 NQO2P16083 231 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 F2RP25116 425 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 OR4A47Q6IF82 309 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 CADM3Q8N126 398 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 ARRDC1Q8N5I2 433 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 DIRAS2Q96HU8 199 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 OR5B12Q96R08 314 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 PHB2Q99623 299 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 RSRP1Q9BUV0 290 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 COMMD9Q9P000 198 aa13.34□□□□□ -0.27
LMCD1-204ENST00000426878 A0A0G2JLM5 398 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 M0QYG6 137 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 CD74P04233 296 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 CD3DP04234 171 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 RLN1P04808 185 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 RPL8P62917 257 aaKnown RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 EGFEM1PQ0D2K5 195 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 RNASE10Q5GAN6 216 aaKnown RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 LHFPL1Q86WI0 220 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 TMEM229BQ8NBD8 167 aa13.33□□□□□ -0.28
LMCD1-204ENST00000426878 ADAD2Q8NCV1 583 aaKnown RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 DGCR14Q96DF8 476 aaKnown RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 TINAGL1Q9GZM7 467 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 RBM38Q9H0Z9 239 aaKnown RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 FAM212BQ9NTI7 297 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-204ENST00000426878 IFNA6P05013 189 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 OR9G9P0C7N8 305 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 RAB25P57735 213 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 DGCR2P98153 550 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 RNASE12Q5GAN4 147 aaKnown RBP13.32□□□□□ -0.28
LMCD1-204ENST00000426878 SSX9Q7RTT3 188 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 TTC9CQ8N5M4 171 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 SMIM4Q8WVI0 70 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 DPF1Q92782 380 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
LMCD1-204ENST00000426878 ZNF355PQ9NSJ1 428 aa13.32□□□□□ -0.28
LMCD1-204ENST00000426878 TEX22C9J3V5 150 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 ZNF701M0R085 212 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-204ENST00000426878 S1PR2O95136 353 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 ZNF735P0CB33 412 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 S100GP29377 79 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
LMCD1-204ENST00000426878 TAS2R19P59542 299 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 C10orf55Q5SWW7 151 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 SLC25A42Q86VD7 318 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 MCFD2Q8NI22 146 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 USMG5Q96IX5 58 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 SOSTQ9BQB4 213 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 ALX4Q9H161 411 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-204ENST00000426878 COA4Q9NYJ1 87 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 TGP01266 2768 aa13.31□□□□□ -0.28
LMCD1-204ENST00000426878 LINC01619G3V211 115 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 UPK2O00526 184 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 MPPED1O15442 326 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 HSPB1P04792 205 aaKnown RBP13.3□□□□□ -0.28
LMCD1-204ENST00000426878 APELAP0DMC3 54 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 HLA-GP17693 338 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 IL18Q14116 193 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 ZNF486Q96H40 463 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-204ENST00000426878 SLC2A9Q9NRM0 540 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 TRBV9A0A0B4J1U6 114 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 C13orf42A0A1B0GVH6 325 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 A0A1B0GW64 132 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 E7EUB6 86 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 GSTZ1O43708 216 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-204ENST00000426878 IGHV3-11P01762 117 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 TNFSF8P32971 234 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 PHLDA2Q53GA4 152 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 STEAP1BQ6NZ63 245 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 TERB2Q8NHR7 220 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 HRASLSQ9HDD0 168 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 TMEM140Q9NV12 185 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 AURKAIP1Q9NWT8 199 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-204ENST00000426878 ZMAT5Q9UDW3 170 aaKnown RBP13.3□□□□□ -0.28
LMCD1-204ENST00000426878 RSL24D1Q9UHA3 163 aaKnown RBP13.3□□□□□ -0.28
LMCD1-204ENST00000426878 ZNF257Q9Y2Q1 563 aa13.3□□□□□ -0.28
LMCD1-204ENST00000426878 IGHV4OR15-8A0A075B7B6 117 aa13.29□□□□□ -0.28
LMCD1-204ENST00000426878 A0A087WW49 117 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms