RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 DNAJC4Q9NNZ3 241 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 YPEL1O60688 119 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 SULT1A2P50226 295 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 DTX1Q86Y01 620 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 NUP37Q8NFH4 326 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 YPEL2Q96QA6 119 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 NUP210Q8TEM1 1887 aaPredicted RBP11.65□□□□□ -0.54
RPL28-202ENST00000426763 PROB1E7EW31 1015 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 TMEM133Q9H2Q1 129 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 PLAUP00749 431 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 PF4P02776 101 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 ZNF497Q6ZNH5 498 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 CLDN16Q9Y5I7 305 aa11.65□□□□□ -0.54
RPL28-202ENST00000426763 DLK1P80370 383 aa11.65□□□□□ -0.55
RPL28-202ENST00000426763 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.55
RPL28-202ENST00000426763 DHRS11Q6UWP2 260 aa11.65□□□□□ -0.55
RPL28-202ENST00000426763 STPG2Q8N412 459 aa11.65□□□□□ -0.55
RPL28-202ENST00000426763 PAQR4Q8N4S7 273 aaPredicted RBP11.65□□□□□ -0.55
RPL28-202ENST00000426763 CLRN3Q8NCR9 226 aa11.65□□□□□ -0.55
RPL28-202ENST00000426763 TXNDC17Q9BRA2 123 aa11.65□□□□□ -0.55
RPL28-202ENST00000426763 TRBV6-7A0A0A0MS04 114 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 ERVH48-1M5A8F1 160 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 BCL2P10415 239 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 TCL1AP56279 114 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 DOCK8Q8NF50 2099 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 NPPCP23582 126 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 UCP1P25874 307 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 OR4A47Q6IF82 309 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
RPL28-202ENST00000426763 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 SEC11CQ9BY50 192 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 WDFY1Q8IWB7 410 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 FAM24BQ8N5W8 94 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 CHAC2Q8WUX2 184 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 NPIPB3Q92617 1050 aa11.64□□□□□ -0.55
RPL28-202ENST00000426763 TRAV24A0A0B4J272 114 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 PMCHP20382 165 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 AWAT1Q58HT5 328 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 PPP1R27Q86WC6 154 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 KIAA1671Q9BY89 1806 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 A0A087WV48 116 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 A0A0G2JLM5 398 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 SLC25A28Q96A46 364 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 MFSD2BA6NFX1 497 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 CA2P00918 260 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 KRTDAPP60985 99 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 HIST1H3AP68431 136 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 PSG9Q00887 426 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 ARPC1AQ92747 370 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 NOTCH4Q99466 2003 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 JMJD8Q96S16 334 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 TCF15Q12870 199 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 FAM89BQ8N5H3 189 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 OR51G1Q8NGK1 321 aa11.63□□□□□ -0.55
RPL28-202ENST00000426763 C1QTNF9BB2RNN3 333 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 SNRPCP09234 159 aaKnown RBP11.62□□□□□ -0.55
RPL28-202ENST00000426763 C1QTNF9P0C862 333 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 H2BFSP57053 126 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 HIST3H3Q16695 136 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 DGAT2L7PQ6IED9 249 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 ZNF474Q6S9Z5 364 aaPredicted RBP11.62□□□□□ -0.55
RPL28-202ENST00000426763 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
RPL28-202ENST00000426763 DEFA6Q01524 100 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 OR4X2Q8NGF9 303 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 SPSB4Q96A44 273 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 FAM169BQ8N8A8 192 aa11.62□□□□□ -0.55
RPL28-202ENST00000426763 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 PGPA6NDG6 321 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
RPL28-202ENST00000426763 MORN2Q502X0 79 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 H3BQ15 152 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 M0QZK8 103 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 AMTP48728 403 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 ZP1P60852 638 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
RPL28-202ENST00000426763 NPFFR1Q9GZQ6 430 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 TMPRSS5Q9H3S3 457 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
RPL28-202ENST00000426763 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
RPL28-202ENST00000426763 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 GBF1Q92538 1859 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 TMSB15BA0A087X1C1 80 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 FCER1GP30273 86 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 NBR2O15453 112 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 OR51M1Q9H341 326 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms