RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 SRSF12Q8WXF0 261 aaKnown RBP10.56□□□□□ -0.72
SNX3-204ENST00000426155 AP3S1Q92572 193 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 ZNF355PQ9NSJ1 428 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 EXTL2Q9UBQ6 330 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 SULT1C2O00338 296 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 TRGV3P03979 118 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 TAS2R46P59540 309 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 SSX9Q7RTT3 188 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 SPAG16Q8N0X2 631 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 OR6Q1Q8NGQ2 317 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 MOB3AQ96BX8 217 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 PHB2Q99623 299 aa10.55□□□□□ -0.72
SNX3-204ENST00000426155 IGHV4OR15-8A0A075B7B6 117 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 A0A087WW49 117 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 MSGN1A6NI15 193 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 CTDSP2O14595 271 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 KBTBD11O94819 623 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 RLN1P04808 185 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 LGALS1P09382 135 aaKnown RBP10.54□□□□□ -0.72
SNX3-204ENST00000426155 MYOD1P15172 320 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 GNRHRP30968 328 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 SLURP1P55000 103 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 DEFA1P59665 94 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 DEFA3P59666 94 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 MSMO1Q15800 293 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 PYHIN1Q6K0P9 492 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 POC5Q8NA72 575 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 DYNC2LI1Q8TCX1 351 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 ABHD1Q96SE0 405 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 SCPEP1Q9HB40 452 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 ADAM30Q9UKF2 790 aa10.54□□□□□ -0.72
SNX3-204ENST00000426155 M0QYG6 137 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 RGS5O15539 181 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 RBMXL2O75526 392 aaKnown RBP10.53□□□□□ -0.72
SNX3-204ENST00000426155 DUS4LO95620 317 aaKnown RBP10.53□□□□□ -0.72
SNX3-204ENST00000426155 RCVRNP35243 200 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 RUNX1Q01196 453 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 ZNF45Q02386 682 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 ZNF616Q08AN1 781 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 DHRS11Q6UWP2 260 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
SNX3-204ENST00000426155 ZBTB34Q8NCN2 500 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 OR52I2Q8NH67 350 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 MCFD2Q8NI22 146 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 COA4Q9NYJ1 87 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 KLK11Q9UBX7 282 aa10.53□□□□□ -0.72
SNX3-204ENST00000426155 A0A1B0GW64 132 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 WI2-2373I1.2A0A1W2PRP0 233 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 HMX3A6NHT5 357 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 E7EUB6 86 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 OR2A4O95047 310 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 S1PR2O95136 353 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 PRH1P02810 166 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 RPA2P15927 270 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 S100A5P33763 92 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 KIR2DS2P43631 304 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 CATR1Q13166 79 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 OR4A47Q6IF82 309 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 MMD2Q8IY49 270 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 TMEM167AQ8TBQ9 72 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 MRAPQ8TCY5 172 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 RHOVQ96L33 236 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 OR2A7Q96R45 310 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.73
SNX3-204ENST00000426155 SLA2Q9H6Q3 261 aa10.52□□□□□ -0.73
SNX3-204ENST00000426155 CCDC59Q9P031 241 aaKnown RBP10.52□□□□□ -0.73
SNX3-204ENST00000426155 TRAV3A0A0B4J244 114 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 SEC14L6B5MCN3 397 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 TEX22C9J3V5 150 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 K7EIL1 84 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 MPPED1O15442 326 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
SNX3-204ENST00000426155 ACTL6BO94805 426 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 PTTG1O95997 202 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 OR8U8P0C7N1 319 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 TSPAN5P62079 268 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 DGCR2P98153 550 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 PHLDA2Q53GA4 152 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 ADAD2Q8NCV1 583 aaKnown RBP10.51□□□□□ -0.73
SNX3-204ENST00000426155 OR6F1Q8NGZ6 308 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 CHAC2Q8WUX2 184 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 DCUN1D4Q92564 292 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 DPF1Q92782 380 aa10.51□□□□□ -0.73
SNX3-204ENST00000426155 DLX4Q92988 240 aaPredicted RBP10.51□□□□□ -0.73
SNX3-204ENST00000426155 MCRIP2Q9BUT9 160 aaKnown RBP10.51□□□□□ -0.73
SNX3-204ENST00000426155 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 ANKRD34BA5PLL1 514 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 CGB1A6NKQ9 187 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 LINC01619G3V211 115 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 H3BUA1 57 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 GPR31O00270 319 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNX3-204ENST00000426155 CREBL2O60519 120 aaPredicted RBP10.5□□□□□ -0.73
SNX3-204ENST00000426155 UPK1BO75841 260 aa10.5□□□□□ -0.73
SNX3-204ENST00000426155 HRASP01112 189 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms