RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 PUSL1Q8N0Z8 303 aaKnown RBP11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 C11orf68Q9H3H3 251 aaKnown RBP11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 PLGRKTQ9HBL7 147 aa11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 KCNK7Q9Y2U2 307 aa11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 RBM7Q9Y580 266 aaKnown RBP11.51□□□□□ -0.57
RPUSD3-204ENST00000424438 IGLV11-55A0A075B6I3 123 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 DPPA5A6NC42 116 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 HMX3A6NHT5 357 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 KBTBD11O94819 623 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 RAB11BQ15907 218 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 PACRGLQ8N7B6 248 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 GALNT14Q96FL9 552 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 GFI1Q99684 422 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 GINS4Q9BRT9 223 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 MND1Q9BWT6 205 aa11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 ZNF436Q9C0F3 470 aaPredicted RBP11.5□□□□□ -0.57
RPUSD3-204ENST00000424438 VPS13DQ5THJ4 4388 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 ABCA13Q86UQ4 5058 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 LAIR2Q6ISS4 152 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 UNQ9165/PRO28630Q6UXU0 137 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 LINC00336Q6ZUF6 198 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 AHSA2Q719I0 299 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 DHRSXQ8N5I4 330 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 ZNF645Q8N7E2 425 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 FAM3DQ96BQ1 224 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 RAB3CQ96E17 227 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 RAB22AQ9UL26 194 aa11.49□□□□□ -0.57
RPUSD3-204ENST00000424438 A0A1B0GW64 132 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 MFNGO00587 321 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 DENRO43583 198 aaKnown RBP11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 FCGR3BO75015 233 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 ARL6IP5O75915 188 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 FGF2P09038 288 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 CD36P16671 472 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 PSMD7P51665 324 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 MED22Q15528 200 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 LAMTOR1Q6IAA8 161 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 KCTD9Q7L273 389 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 OR4S2Q8NH73 311 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 ZNF502Q8TBZ5 544 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 CYGBQ8WWM9 190 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 TMEM190Q8WZ59 177 aa11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 SRSF8Q9BRL6 282 aaKnown RBP11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 LSM2Q9Y333 95 aaKnown RBP11.48□□□□□ -0.57
RPUSD3-204ENST00000424438 OR4C46A6NHA9 309 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 E7EUB6 86 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 CLEC3BP05452 202 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 PTBP1P26599 531 aaKnown RBP eCLIP11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 ADMP35318 185 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 SPHARQ15513 63 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 TRAM1Q15629 374 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 C2orf76Q3KRA6 126 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 C8orf59Q8N0T1 100 aaPredicted RBP11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 C6orf62Q9GZU0 229 aaPredicted RBP11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 RBMX2Q9Y388 322 aaKnown RBP11.47□□□□□ -0.57
RPUSD3-204ENST00000424438 HLA-DQB1P01920 261 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 IFNA4P05014 189 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 CTXN2P0C2S0 81 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 AREGP15514 252 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 DTYMKP23919 212 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 GADD45AP24522 165 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 PSMA1P25786 263 aaKnown RBP11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 CMC4P56277 68 aaPredicted RBP11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 PRR20EP86478 221 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 PRR20CP86479 221 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 PRR20DP86480 221 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 PRR20BP86481 221 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 PRR20AP86496 221 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 EIF4EBP1Q13541 118 aaPredicted RBP11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 ARL6IP1Q15041 203 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 RBMS2Q15434 407 aaKnown RBP11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 OR10R2Q8NGX6 335 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 OR4A5Q8NH83 315 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 VN1R17PQ8TDU5 208 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 AIFM2Q9BRQ8 373 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 DCUN1D5Q9BTE7 237 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 THYN1Q9P016 225 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 OR2W1Q9Y3N9 320 aa11.46□□□□□ -0.57
RPUSD3-204ENST00000424438 TMEM272A0A1B0GTI8 110 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 MFSD2BA6NFX1 497 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 RAB27BO00194 218 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 HRASP01112 189 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 IGHV3-23P01764 117 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 PLET1Q6UQ28 207 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 TMEM91Q6ZNR0 172 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 C19orf35Q6ZS72 473 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 C11orf45Q8TAV5 145 aa11.45□□□□□ -0.58
RPUSD3-204ENST00000424438 C2CD4CQ8TF44 421 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms