RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 OR2S2Q9NQN1 319 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ABRACLQ9P1F3 81 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 GNG12Q9UBI6 72 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 JPT1Q9UK76 154 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ETV7Q9Y603 341 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 A0A0A6YYH2 397 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 CLPSL1A2RUU4 121 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 A6NJ64 397 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 TRDCB7Z8K6 153 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ITGB1BP1O14713 200 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 DFFBO76075 338 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 DIRAS3O95661 229 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 HIST1H1DP16402 221 aaKnown RBP1.96□□□□□ -2.1
VPS13A-208ENST00000423463 SSTR5P35346 364 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 KIR2DS4P43632 304 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 RAB7AP51149 207 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 EFNB2P52799 333 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 RAG2P55895 527 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 PITPNAQ00169 270 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 MXD1Q05195 221 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF816Q0VGE8 651 aaPredicted RBP1.96□□□□□ -2.1
VPS13A-208ENST00000423463 MADCAM1Q13477 382 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ARFRP1Q13795 201 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 KIR2DS1Q14954 304 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 LTC4SQ16873 150 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 CDNFQ49AH0 187 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 MORN2Q502X0 79 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 IDNKQ5T6J7 187 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 BAIAP2L2Q6UXY1 529 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 SLC25A48Q6ZT89 311 aaKnown RBP1.96□□□□□ -2.1
VPS13A-208ENST00000423463 KRTAP7-1Q8IUC3 87 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 C3orf56Q8N813 242 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF439Q8NDP4 499 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 OR1L1Q8NH94 360 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 TOMM40LQ969M1 308 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 RPEQ96AT9 228 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 GFRA4Q9GZZ7 299 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 TOLLIPQ9H0E2 274 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 DCSTAMPQ9H295 470 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 RNF167Q9H6Y7 350 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 RANBP3Q9H6Z4 567 aaPredicted RBP1.96□□□□□ -2.1
VPS13A-208ENST00000423463 C12orf4Q9NQ89 552 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 DIABLOQ9NR28 239 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 TNFRSF19Q9NS68 423 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 RHBDL2Q9NX52 303 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 AK3Q9UIJ7 227 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 SPATA2Q9UM82 520 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 HILPDAQ9Y5L2 63 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 ZANQ9Y493 2812 aa1.96□□□□□ -2.1
VPS13A-208ENST00000423463 CSMD2Q7Z408 3487 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 IGHV3-43A0A0B4J1X8 118 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 A0A0B4J203 849 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 SMIM30A4D0T7 59 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 MFNGO00587 321 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 TXNL1O43396 289 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 LANCL1O43813 399 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 PRAF2O60831 178 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 GABARAPO95166 117 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CTXN2P0C2S0 81 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 IGHV3-43DP0DP04 118 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 DTYMKP23919 212 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 ZBTB25P24278 435 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CD1BP29016 333 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 TALDO1P37837 337 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 RPL5P46777 297 aaKnown RBP1.95□□□□□ -2.1
VPS13A-208ENST00000423463 SERPINB10P48595 397 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 GNG10P50151 68 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 RAB13P51153 203 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF137PP52743 207 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 LSM3P62310 102 aaKnown RBP1.95□□□□□ -2.1
VPS13A-208ENST00000423463 HLA-DRB3P79483 266 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 EBI3Q14213 229 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 LY6EQ16553 131 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 MOGAT2Q3SYC2 334 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 ZFP69Q49AA0 526 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CT45A1Q5HYN5 189 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 UTF1Q5T230 341 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 OLFML2AQ68BL7 652 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 Q6ZS49 121 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 GPR141Q7Z602 305 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 OR4A4PQ8NGN8 299 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 OR4C13Q8NGP0 309 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 OR5H6Q8NGV6 325 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 OR10X1Q8NGY0 326 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CT45A3Q8NHU0 189 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 UBALD1Q8TB05 177 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 LGALS14Q8TCE9 139 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CAPSLQ8WWF8 208 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 ACOT12Q8WYK0 555 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 TMEM190Q8WZ59 177 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 LEAP2Q969E1 77 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 S100A16Q96FQ6 103 aaKnown RBP1.95□□□□□ -2.1
VPS13A-208ENST00000423463 AKR1E2Q96JD6 320 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 BCL7BQ9BQE9 202 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 ABCG5Q9H222 651 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 CELSR1Q9NYQ6 3014 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 A0A075B6Q4 140 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 TRAV18A0A075B6X5 111 aa1.95□□□□□ -2.1
VPS13A-208ENST00000423463 IGHV1-3A0A0C4DH29 117 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms