RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 PACRGQ96M98 296 aaPredicted RBP11.4□□□□□ -0.59
CTCFL-203ENST00000422109 TMEM140Q9NV12 185 aa11.4□□□□□ -0.59
CTCFL-203ENST00000422109 ZGRF1Q86YA3 2104 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 ACTL6BO94805 426 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 CD82P27701 267 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 GUSBP1Q15486 140 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 TIMM9Q9Y5J7 89 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 MBP02144 154 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 C1QTNF9P0C862 333 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 C22orf34Q6ZV56 151 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 ZNF114Q8NC26 417 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 HIPK2Q9H2X6 1198 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 GFOD1Q9NXC2 390 aa11.39□□□□□ -0.59
CTCFL-203ENST00000422109 ADH4P08319 380 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 THBS3P49746 956 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 GNB1P62873 340 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 PLSCR4Q9NRQ2 329 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 HPRT1P00492 218 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 PFN1P07737 140 aaKnown RBP11.38□□□□□ -0.59
CTCFL-203ENST00000422109 ZNF474Q6S9Z5 364 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-203ENST00000422109 CCL13Q99616 98 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 CALYQ9NYX4 217 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 SLC25A15Q9Y619 301 aa11.38□□□□□ -0.59
CTCFL-203ENST00000422109 A0A1B0GUS0 222 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 SRRM5B3KS81 715 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 K7EM74 188 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 FAM27E3Q08E93 113 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 TREML4Q6UXN2 200 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 RND1Q92730 232 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 HIST1H2BLQ99880 126 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 ZNF705GA8MUZ8 300 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-203ENST00000422109 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-203ENST00000422109 MOB3BQ86TA1 216 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 FAM216BQ8N7L0 139 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 IFI27L2Q9H2X8 130 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 TRBV24-1A0A075B6N3 115 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 PHOX2AO14813 284 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 MGST3O14880 152 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 MMP23AO75900 390 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 UNQ6494/PRO21346Q6UXR6 183 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 MGST2Q99735 147 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 TCF19Q9Y242 345 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
CTCFL-203ENST00000422109 FOXH1O75593 365 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 IGLV1-44P01699 117 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 GATA2P23769 480 aaPredicted RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 GNB2P62879 340 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 CT45A1Q5HYN5 189 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 MBNL2Q5VZF2 373 aaKnown RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 Q8N7P7 452 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 CT45A3Q8NHU0 189 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 PARD6GQ9BYG4 376 aaPredicted RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 PTPRBP23467 1997 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 SAA2-SAA4A0A096LPE2 208 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 SCO2A0A1W2PP80 73 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 ZNF320A2RRD8 509 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 TMEM250H0YL14 139 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 SNRPCP09234 159 aaKnown RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 SAA2P0DJI9 122 aaPredicted RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 LOXL3P58215 753 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 CCL8P80075 99 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 HTD2P86397 168 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 CENPVQ7Z7K6 275 aaPredicted RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 OR2T10Q8NGZ9 312 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 TMEM170AQ8WVE7 144 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 MRPL37Q9BZE1 423 aaKnown RBP11.36□□□□□ -0.59
CTCFL-203ENST00000422109 PLXNB1O43157 2135 aa11.36□□□□□ -0.59
CTCFL-203ENST00000422109 ABCA1O95477 2261 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 SPCS3P61009 180 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 RELBQ01201 579 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 TCF23Q7RTU1 214 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 ZADH2Q8N4Q0 377 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 SRD5A3Q9H8P0 318 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
CTCFL-203ENST00000422109 NBASA2RRP1 2371 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 ANKRD11Q6UB99 2663 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-203ENST00000422109 GFRA3O60609 400 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 HRASP01112 189 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 CGAP01215 116 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 NDUFB7P17568 137 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 MLANAQ16655 118 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 C1orf162Q8NEQ5 155 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-203ENST00000422109 DMRT1Q9Y5R6 373 aa11.35□□□□□ -0.59
CTCFL-203ENST00000422109 REG1BP48304 166 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 ELOA3CA0A087WX78 387 aaPredicted RBP11.34□□□□□ -0.59
CTCFL-203ENST00000422109 AHRRA9YTQ3 701 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 KALRNO60229 2985 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 MRPS11P82912 194 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms