RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 AURKAIP1Q9NWT8 199 aaPredicted RBP20.45■□□□□ 0.86
CDK9-202ENST00000421939 TGP01266 2768 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 MPPED1O15442 326 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 IGHV3-11P01762 117 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 RLN1P04808 185 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 HOXD3P31249 432 aaPredicted RBP20.44■□□□□ 0.86
CDK9-202ENST00000421939 SSX9Q7RTT3 188 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 CMTM1Q8IZ96 169 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 CD300LFQ8TDQ1 290 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 ABHD1Q96SE0 405 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 AIFM2Q9BRQ8 373 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 KLK11Q9UBX7 282 aa20.44■□□□□ 0.86
CDK9-202ENST00000421939 TAS2R31P59538 309 aa20.43■□□□□ 0.86
CDK9-202ENST00000421939 COA4Q9NYJ1 87 aa20.43■□□□□ 0.86
CDK9-202ENST00000421939 MTFP1Q9UDX5 166 aa20.43■□□□□ 0.86
CDK9-202ENST00000421939 M0QYG6 137 aa20.42■□□□□ 0.86
CDK9-202ENST00000421939 GPR31O00270 319 aa20.42■□□□□ 0.86
CDK9-202ENST00000421939 PGLYRP1O75594 196 aaPredicted RBP20.42■□□□□ 0.86
CDK9-202ENST00000421939 BRI3O95415 125 aa20.42■□□□□ 0.86
CDK9-202ENST00000421939 HPRT1P00492 218 aa20.42■□□□□ 0.86
CDK9-202ENST00000421939 OR9G9P0C7N8 305 aa20.42■□□□□ 0.86
CDK9-202ENST00000421939 EGFEM1PQ0D2K5 195 aa20.42■□□□□ 0.86
CDK9-202ENST00000421939 ADAD2Q8NCV1 583 aaKnown RBP20.42■□□□□ 0.86
CDK9-202ENST00000421939 TINAGL1Q9GZM7 467 aaPredicted RBP20.42■□□□□ 0.86
CDK9-202ENST00000421939 LINC01619G3V211 115 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 S1PR2O95136 353 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 NQO2P16083 231 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 MAS1LP35410 378 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 RNASE10Q5GAN6 216 aaKnown RBP20.41■□□□□ 0.86
CDK9-202ENST00000421939 OR4A47Q6IF82 309 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 OR4A5Q8NH83 315 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 FCAMRQ8WWV6 532 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 PLEKHA2Q9HB19 425 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 BET1LQ9NYM9 111 aa20.41■□□□□ 0.86
CDK9-202ENST00000421939 IGHV4OR15-8A0A075B7B6 117 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 A0A087WW49 117 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 A0A0G2JLM5 398 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 C13orf42A0A1B0GVH6 325 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 TBPP20226 339 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 RPL27AP46776 148 aaKnown RBP20.4■□□□□ 0.86
CDK9-202ENST00000421939 KRTAP10-11P60412 298 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 RPL8P62917 257 aaKnown RBP20.4■□□□□ 0.86
CDK9-202ENST00000421939 POU2AF1Q16633 256 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 LPCAT3Q6P1A2 487 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 SLIRPQ9GZT3 109 aaKnown RBP20.4■□□□□ 0.86
CDK9-202ENST00000421939 C6orf62Q9GZU0 229 aaPredicted RBP20.4■□□□□ 0.86
CDK9-202ENST00000421939 HRASLSQ9HDD0 168 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 COMMD9Q9P000 198 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 CEPT1Q9Y6K0 416 aa20.4■□□□□ 0.86
CDK9-202ENST00000421939 SEC14L6B5MCN3 397 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 GABARAPH6UMI1 98 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 IFNA6P05013 189 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 F2RP25116 425 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 MRPS10P82664 201 aaKnown RBP20.39■□□□□ 0.85
CDK9-202ENST00000421939 DGCR2P98153 550 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 PHLDA2Q53GA4 152 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 C9orf66Q5T8R8 295 aa20.39■□□□□ 0.85
CDK9-202ENST00000421939 TEX22C9J3V5 150 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 CD3DP04234 171 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 HSPB1P04792 205 aaKnown RBP20.38■□□□□ 0.85
CDK9-202ENST00000421939 HLA-GP17693 338 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 S100GP29377 79 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 SLURP1P55000 103 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 DEFA5Q01523 94 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 SLC38A6Q8IZM9 456 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 MRAPQ8TCY5 172 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 DGCR14Q96DF8 476 aaKnown RBP20.38■□□□□ 0.85
CDK9-202ENST00000421939 DIRAS2Q96HU8 199 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 RSRP1Q9BUV0 290 aa20.38■□□□□ 0.85
CDK9-202ENST00000421939 HMX3A6NHT5 357 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 IL6RP08887 468 aaPredicted RBP20.37■□□□□ 0.85
CDK9-202ENST00000421939 UCP3P55916 312 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 ERVK-16P61578 105 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 ARRDC1Q8N5I2 433 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 DMBX1Q8NFW5 382 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 DCUN1D4Q92564 292 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 FYTTD1Q96QD9 318 aaKnown RBP20.37■□□□□ 0.85
CDK9-202ENST00000421939 TMEM140Q9NV12 185 aa20.37■□□□□ 0.85
CDK9-202ENST00000421939 OVOL1O14753 267 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 TAS2R19P59542 299 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 SLC25A42Q86VD7 318 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 TTC9CQ8N5M4 171 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 TMEM229BQ8NBD8 167 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 SMIM4Q8WVI0 70 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 USMG5Q96IX5 58 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 RABL2AQ9UBK7 228 aaPredicted RBP20.36■□□□□ 0.85
CDK9-202ENST00000421939 RABL2BQ9UNT1 228 aa20.36■□□□□ 0.85
CDK9-202ENST00000421939 A0A1B0GW64 132 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 CCDC160A6NGH7 325 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 E7EUB6 86 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 UPK2O00526 184 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 ZNF735P0CB33 412 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 SSBP1Q04837 148 aaKnown RBP20.35■□□□□ 0.85
CDK9-202ENST00000421939 IL18Q14116 193 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 LHFPL1Q86WI0 220 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 DLX4Q92988 240 aaPredicted RBP20.35■□□□□ 0.85
CDK9-202ENST00000421939 ZMAT5Q9UDW3 170 aaKnown RBP20.35■□□□□ 0.85
CDK9-202ENST00000421939 ZNF257Q9Y2Q1 563 aa20.35■□□□□ 0.85
CDK9-202ENST00000421939 MARCH11A6NNE9 402 aa20.34■□□□□ 0.85
CDK9-202ENST00000421939 RBMXL2O75526 392 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms