RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 VSIG4Q9Y279 399 aa14.19□□□□□ -0.14
ECHDC3-202ENST00000420401 MSGN1A6NI15 193 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 GSTZ1O43708 216 aaPredicted RBP14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 KBTBD11O94819 623 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 RAB3DO95716 219 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 NQO2P16083 231 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 F2RP25116 425 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 MEF2DQ14814 521 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 PUSL1Q8N0Z8 303 aaKnown RBP14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 ZNF491Q8N8L2 437 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 OR4A5Q8NH83 315 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 TMEM167AQ8TBQ9 72 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 C4orf3Q8WVX3 66 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 DGCR14Q96DF8 476 aaKnown RBP14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 SOSTQ9BQB4 213 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 PLEKHA2Q9HB19 425 aa14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 KMT2CQ8NEZ4 4911 aaKnown RBP14.18□□□□□ -0.14
ECHDC3-202ENST00000420401 SOX15O60248 233 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 PGAM2P15259 253 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 MAS1LP35410 378 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 PHLDA2Q53GA4 152 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 SSX9Q7RTT3 188 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 LHFPL1Q86WI0 220 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 OR5T1Q8NG75 326 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 SRSF12Q8WXF0 261 aaKnown RBP14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 SPIN2AQ99865 258 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 SPIN2BQ9BPZ2 258 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 SLA2Q9H6Q3 261 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 ZNF355PQ9NSJ1 428 aa14.17□□□□□ -0.14
ECHDC3-202ENST00000420401 H3BUA1 57 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 CCL24O00175 119 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 MPPED1O15442 326 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 KIAA0141Q14154 515 aaPredicted RBP14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 SCGB2B2Q4G0G5 96 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 OR4A47Q6IF82 309 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 MRPL41Q8IXM3 137 aaKnown RBP14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 DMBX1Q8NFW5 382 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 OR4D10Q8NGI6 311 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 TERB2Q8NHR7 220 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 ZNF486Q96H40 463 aaPredicted RBP14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 HRASLSQ9HDD0 168 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 BET1LQ9NYM9 111 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 COMMD9Q9P000 198 aa14.16□□□□□ -0.14
ECHDC3-202ENST00000420401 DISC1C4P0D8 188 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 AKAIN1P0CW23 69 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 LPAR6P43657 344 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 ERVK-16P61578 105 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 RPL8P62917 257 aaKnown RBP14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 POU2AF1Q16633 256 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 ETV3LQ6ZN32 361 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 TBC1D26Q86UD7 250 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 LINC00482Q8N8I6 264 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 ZFAND1Q8TCF1 268 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 CASTOR1Q8WTX7 329 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 RAX2Q96IS3 184 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 MS4A10Q96PG2 267 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 P2RX4Q99571 388 aa14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 FAM212BQ9NTI7 297 aaPredicted RBP14.15□□□□□ -0.14
ECHDC3-202ENST00000420401 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 S1PR2O95136 353 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 TRGV3P03979 118 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 HLA-GP17693 338 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 PTBP1P26599 531 aaKnown RBP eCLIP14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 ECI1P42126 302 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 TPPP2P59282 170 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 RUNX1Q01196 453 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 DEFB136Q30KP8 78 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 PYDC2Q56P42 97 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 ASPHD1Q5U4P2 390 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 RCC1LQ96I51 464 aaKnown RBP14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 THAP7Q9BT49 309 aaPredicted RBP14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 GNB4Q9HAV0 340 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 SLC2A9Q9NRM0 540 aa14.14□□□□□ -0.15
ECHDC3-202ENST00000420401 ANKRD20A5PA0PJZ0 165 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 BRI3O95415 125 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 DUS4LO95620 317 aaKnown RBP14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 OR9G9P0C7N8 305 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 APELAP0DMC3 54 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 RPL27AP46776 148 aaKnown RBP14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 PPP5CP53041 499 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 RND3P61587 244 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 OR11H1Q8NG94 326 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 OR1N2Q8NGR9 330 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 DUX3Q96PT4 197 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 OR5B12Q96R08 314 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 PRRT1Q99946 306 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 TMEM140Q9NV12 185 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 COA4Q9NYJ1 87 aa14.13□□□□□ -0.15
ECHDC3-202ENST00000420401 A0A0G2JLM5 398 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 DPPA5A6NC42 116 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 MARCH11A6NNE9 402 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 I3L521 148 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 UPK2O00526 184 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 ZNF735P0CB33 412 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 PIGPP57054 158 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 RAB25P57735 213 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 OXLD1Q5BKU9 147 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 SPANXN2Q5MJ10 180 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 C10orf55Q5SWW7 151 aa14.12□□□□□ -0.15
ECHDC3-202ENST00000420401 CCDC190Q86UF4 302 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms