RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 AQP1P29972 269 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 RANP62826 216 aaKnown RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SELENOWP63302 87 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 RHOGP84095 191 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF92Q03936 586 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR7A5Q15622 319 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 LDLRAD2Q5SZI1 272 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 DNM1P46Q6ZS02 220 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TMEM156Q8N614 296 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF738Q8NE65 137 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 PLPP5Q8NEB5 264 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TSTD1Q8NFU3 115 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SFXN5Q8TD22 340 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 RGP1Q92546 391 aaPredicted RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 PPCDCQ96CD2 204 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 WDR34Q96EX3 536 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SMIM10Q96HG1 83 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 LYSMD1Q96S90 227 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 AGMATQ9BSE5 352 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 WFDC1Q9HC57 220 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 RAB22AQ9UL26 194 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 FARSAQ9Y285 508 aaKnown RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 HECTD1Q9ULT8 2610 aa3.96□□□□□ -1.77
VPS13A-207ENST00000419472 CNTRLQ7Z7A1 2325 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 TGIF2-C20orf24A0A0A6YYL0 155 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 NTN3O00634 580 aaPredicted RBP3.96□□□□□ -1.78
VPS13A-207ENST00000419472 PDYNP01213 254 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 IGLV3-19P01714 112 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 STATHP02808 62 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 OR12D1P0DN82 309 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SNCAP37840 140 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 GPR6P46095 362 aaPredicted RBP3.96□□□□□ -1.78
VPS13A-207ENST00000419472 DNASE1L1P49184 302 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SULT1A2P50226 295 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 TAS2R19P59542 299 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 GNB1P62873 340 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 H3F3AP84243 136 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 CDK5Q00535 292 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 UNC119Q13432 240 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 BATFQ16520 125 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SLC25A35Q3KQZ1 300 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 UBE2NLQ5JXB2 153 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 AWAT2Q6E213 333 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 OR6N1Q8NGY5 312 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 OR51E1Q8TCB6 317 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 GPR146Q96CH1 333 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF649Q9BS31 505 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM204Q9BSN7 226 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 RSG1Q9BU20 258 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 OR5AC2Q9NZP5 309 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF107Q9UII5 783 aaPredicted RBP3.96□□□□□ -1.78
VPS13A-207ENST00000419472 PRRC2CQ9Y520 2896 aaKnown RBP3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SPTBP11277 2137 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 TRBV6-7A0A0A0MS04 114 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 IGHV2OR16-5A0A0B4J2B6 119 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM213A2RRL7 107 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 CLDN34H7C241 214 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SLC31A1O15431 190 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 OR5G3P0C626 314 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 PGA4P0DJD7 388 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 PGA5P0DJD9 388 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 GTF2F2P13984 249 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 CRYBA4P53673 196 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SLC35A1P78382 337 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 AADACL3Q5VUY0 350 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SAMD13Q5VXD3 122 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 Q6ZVH6 145 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 NECAP1Q8NC96 275 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM106AQ96A25 262 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 GINS3Q9BRX5 216 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SLC35B3Q9H1N7 401 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 FKBP11Q9NYL4 201 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 KLF12Q9Y4X4 402 aa3.96□□□□□ -1.78
VPS13A-207ENST00000419472 SPTAN1Q13813 2472 aaKnown RBP3.96□□□□□ -1.78
VPS13A-207ENST00000419472 LRRK1Q38SD2 2015 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 FRYQ5TBA9 3013 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 IGHV3-16A0A0C4DH30 117 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 CORTO00230 105 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 GCM2O75603 506 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 OR8U9P0C7N5 309 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 PGAM2P15259 253 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 ATF1P18846 271 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TPTE2P1Q5T6R2 138 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 C9orf66Q5T8R8 295 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF343Q6P1L6 599 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 FAM220AQ7Z4H9 259 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 LYG2Q86SG7 212 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF740Q8NDX6 193 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 PPP1R1CQ8WVI7 109 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 GEMIN6Q8WXD5 167 aaKnown RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 FLYWCH2Q96CP2 140 aaKnown RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 REEP6Q96HR9 211 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 OR2V2Q96R30 315 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 SLC17A9Q9BYT1 436 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TCEAL2Q9H3H9 227 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 LRTM1Q9HBL6 345 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 CALYQ9NYX4 217 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 EML5Q05BV3 1969 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 SCN8AQ9UQD0 1980 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 SEC16AO15027 2179 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms