RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PSG5Q15238 335 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 PDLIM3Q53GG5 364 aaPredicted RBP5.39□□□□□ -1.55
HMGN1-205ENST00000419378 CXorf66Q5JRM2 361 aaPredicted RBP5.39□□□□□ -1.55
HMGN1-205ENST00000419378 ZNF695Q8IW36 515 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 WFDC9Q8NEX5 89 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 SLC25A46Q96AG3 418 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 RNF5Q99942 180 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 FUNDC2Q9BWH2 189 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 AUNIPQ9H7T9 357 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 SLC35D1Q9NTN3 355 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 METTL1Q9UBP6 276 aaKnown RBP5.39□□□□□ -1.55
HMGN1-205ENST00000419378 ANXA10Q9UJ72 324 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 FBXO7Q9Y3I1 522 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 RBM7Q9Y580 266 aaKnown RBP5.39□□□□□ -1.55
HMGN1-205ENST00000419378 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 IGKV1D-13A0A0B4J2D9 117 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 TEX22C9J3V5 150 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 J3QRK9 145 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 RHODO00212 210 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 FCN1O00602 326 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 CA2P00918 260 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 IGLV2-23P01705 113 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 CTXN2P0C2S0 81 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 IGKV1-13P0DP09 117 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 PTHLHP12272 177 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 IGLL1P15814 213 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 NFYAP23511 347 aaPredicted RBP5.38□□□□□ -1.55
HMGN1-205ENST00000419378 DUTP33316 252 aaKnown RBP5.38□□□□□ -1.55
HMGN1-205ENST00000419378 CRIP2P52943 208 aaPredicted RBP5.38□□□□□ -1.55
HMGN1-205ENST00000419378 ARPC4P59998 168 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 VBP1P61758 197 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 CX3CL1P78423 397 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 ECSCRQ19T08 205 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 DEFB136Q30KP8 78 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 UBE2NLQ5JXB2 153 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 TMEM69Q5SWH9 247 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 ZNF660Q6AZW8 331 aaPredicted RBP5.38□□□□□ -1.55
HMGN1-205ENST00000419378 CNIH2Q6PI25 160 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 HOGA1Q86XE5 327 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 ZNF645Q8N7E2 425 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 GVQW1Q8N7I0 195 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 MINDY2Q8NBR6 621 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 MYOZ3Q8TDC0 251 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 FLYWCH2Q96CP2 140 aaKnown RBP5.38□□□□□ -1.55
HMGN1-205ENST00000419378 ADTRPQ96IZ2 230 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 HARBI1Q96MB7 349 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 DUX3Q96PT4 197 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 CLCC1Q96S66 551 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 P2RX4Q99571 388 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 TSNAXQ99598 290 aaKnown RBP5.38□□□□□ -1.55
HMGN1-205ENST00000419378 KRTAP17-1Q9BYP8 105 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 AAMDCQ9H7C9 122 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 DIABLOQ9NR28 239 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 OR2W1Q9Y3N9 320 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 WSB1Q9Y6I7 421 aa5.38□□□□□ -1.55
HMGN1-205ENST00000419378 A0A1W2PN81 502 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 MEIS3P1A6NDR6 274 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 GAGE10A6NGK3 116 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 XRCC3O43542 346 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 SLC25A17O43808 307 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 SOX15O60248 233 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 GABARAPO95166 117 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 HLA-DQB1P01920 261 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 FCER2P06734 321 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 CHRNA7P36544 502 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 MYCNOSP40205 109 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 CDX1P47902 265 aaPredicted RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 LUMP51884 338 aaPredicted RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 TAS2R20P59543 309 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 SSBP2P81877 361 aaPredicted RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 CBX3Q13185 183 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 CTF1Q16619 201 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 RTL8BQ17RB0 113 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 TMEM268Q5VZI3 342 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 ZNF562Q6V9R5 426 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 PPP1R27Q86WC6 154 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 BEST4Q8NFU0 473 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 C4orf3Q8WVX3 66 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 ARPC1AQ92747 370 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 SNAPC3Q92966 411 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 S100A16Q96FQ6 103 aaKnown RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 FAM103A1Q9BTL3 118 aaKnown RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 NAA50Q9GZZ1 169 aaKnown RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 NECAP2Q9NVZ3 263 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 PPP1R14DQ9NXH3 145 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 PEMTQ9UBM1 199 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 FOXA2Q9Y261 457 aaPredicted RBP5.37□□□□□ -1.55
HMGN1-205ENST00000419378 A3GALT2U3KPV4 340 aa5.37□□□□□ -1.55
HMGN1-205ENST00000419378 SRRM4A7MD48 611 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 CCL24O00175 119 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 ARPC1BO15143 372 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 FCGR3BO75015 233 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 SLC22A5O76082 557 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 DUS4LO95620 317 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 CRYZL1O95825 349 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 PPYP01298 95 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 PRB2P02812 416 aaPredicted RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 CRYGBP07316 175 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms