RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 RNASEK-C17orf49H0YIS7 233 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 J3QLI3 93 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 SYNGR2O43760 224 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 PITX3O75364 302 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 KBTBD11O94819 623 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 IFNA7P01567 189 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 IFNA17P01571 189 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 IAPPP10997 89 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 CXCL2P19875 107 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 RPL12P30050 165 aaKnown RBP4.83□□□□□ -1.64
HMGB3-202ENST00000419110 UBE2E1P51965 193 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 DLX1P56177 255 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 KRTAP10-9P60411 292 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 UBE2KP61086 200 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 POLR2GP62487 172 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3-202ENST00000419110 HBG1P69891 147 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 HBG2P69892 147 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 PAX2Q02962 417 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 PRB3Q04118 309 aaPredicted RBP4.83□□□□□ -1.64
HMGB3-202ENST00000419110 IL15RAQ13261 267 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 OPCMLQ14982 345 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 MIDNQ504T8 468 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 GPR157Q5UAW9 335 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 LAMTOR1Q6IAA8 161 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 PRSS57Q6UWY2 283 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 ZNF767PQ75MW2 155 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 MOB3BQ86TA1 216 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 SLC51BQ86UW2 128 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 C11orf42Q8N5U0 333 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 OR2C3Q8N628 320 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 LINC01356Q8N9X3 169 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 OR4A5Q8NH83 315 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 DTD1Q8TEA8 209 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 LHX4Q969G2 390 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 ST6GALNAC6Q969X2 333 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 TBX15Q96SF7 602 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 ZNF471Q9BX82 626 aaPredicted RBP4.83□□□□□ -1.64
HMGB3-202ENST00000419110 MAGT1Q9H0U3 335 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 PLEKHA3Q9HB20 300 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 LYRM2Q9NU23 88 aaPredicted RBP4.83□□□□□ -1.64
HMGB3-202ENST00000419110 BET1LQ9NYM9 111 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 KIAA1456Q9P272 454 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 FBXL17Q9UF56 701 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 FOXA2Q9Y261 457 aaPredicted RBP4.83□□□□□ -1.64
HMGB3-202ENST00000419110 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 BORCS7-ASMTA0A0B4J1R7 106 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 MSGN1A6NI15 193 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 H0YIZ8 118 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 H3BP45 60 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 TAAR5O14804 337 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 RGS13O14921 159 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 TIMM23O14925 209 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 NPFFO15130 113 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 SLC25A17O43808 307 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 PROP1O75360 226 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 ACTL6BO94805 426 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 IGKV1-16P04430 117 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 OR9G9P0C7N8 305 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 TPT1P13693 172 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 SAA4P35542 130 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 LGALS7P47929 136 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 TAS2R30P59541 319 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 SPCS3P61009 180 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 RPS16P62249 146 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 RPL8P62917 257 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 RPP30P78346 268 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 EWSR1Q01844 656 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 LOXL1Q08397 574 aaPredicted RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 TMEM267Q0VDI3 215 aaPredicted RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 ZNF266Q14584 549 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 PLGLAQ15195 96 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 MMDQ15546 238 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 IZUMO4Q1ZYL8 232 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 LGALSLQ3ZCW2 172 aaPredicted RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 AARDQ4LEZ3 155 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 CXorf66Q5JRM2 361 aaPredicted RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 SLC25A24Q6NUK1 477 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 ZNF429Q86V71 674 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 PDZD9Q8IXQ8 264 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 MMD2Q8IY49 270 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 VKORC1L1Q8N0U8 176 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 LILRB2Q8N423 598 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 OR8H1Q8NGG4 311 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 OR5B3Q8NH48 314 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 OR52E5Q8NH55 327 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 Q96MF0 132 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 SSBP4Q9BWG4 385 aaPredicted RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 QTRT1Q9BXR0 403 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 COMMD5Q9GZQ3 224 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 RBKSQ9H477 322 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 MMP26Q9NRE1 261 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 FKBP11Q9NYL4 201 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 UBQLN2Q9UHD9 624 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 PAIP2BQ9ULR5 123 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 TCF19Q9Y242 345 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 STRAPQ9Y3F4 350 aaKnown RBP4.82□□□□□ -1.64
HMGB3-202ENST00000419110 AUP1Q9Y679 476 aa4.82□□□□□ -1.64
HMGB3-202ENST00000419110 MED13LQ71F56 2210 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 UNC79Q9P2D8 2635 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 FBN2P35556 2912 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms