RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 ARV1Q9H2C2 271 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 PIEZO1Q92508 2521 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 SNRNP70P08621 437 aaKnown RBP6.88□□□□□ -1.31
USP54-203ENST00000418501 FAM106CPP0CH98 169 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 DEFA5Q01523 94 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 PNKDQ8N490 385 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 OR2T10Q8NGZ9 312 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 TMEM167AQ8TBQ9 72 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 CACNG8Q8WXS5 425 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 LEAP2Q969E1 77 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 QTRT1Q9BXR0 403 aaKnown RBP6.88□□□□□ -1.31
USP54-203ENST00000418501 SLC25A16P16260 332 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 CD1BP29016 333 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 ZNF137PP52743 207 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 PRCDQ00LT1 54 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.88□□□□□ -1.31
USP54-203ENST00000418501 TAF15Q92804 592 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP54-203ENST00000418501 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
USP54-203ENST00000418501 H0YJW9 148 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 TNFRSF13BO14836 293 aaPredicted RBP6.87□□□□□ -1.31
USP54-203ENST00000418501 CT45A6P0DMU7 189 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 CT45A5P0DMU8 189 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 CT45A7P0DMV0 189 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 CDKN1AP38936 164 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 RPL27AP46776 148 aaKnown RBP6.87□□□□□ -1.31
USP54-203ENST00000418501 BPIFB3P59826 476 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
USP54-203ENST00000418501 ZNF383Q8NA42 475 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 SFT2D1Q8WV19 159 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 THYN1Q9P016 225 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 MFSD2BA6NFX1 497 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 IGKV1-39P01597 117 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 IGLV2-14P01704 120 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 IGKV1D-39P04432 117 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 PSMB3P49720 205 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 S100A12P80511 92 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 RNASEH2CQ8TDP1 164 aaKnown RBP6.87□□□□□ -1.31
USP54-203ENST00000418501 WDR61Q9GZS3 305 aaKnown RBP6.87□□□□□ -1.31
USP54-203ENST00000418501 CTSZQ9UBR2 303 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 BUB1B-PAK6H3BSN5 160 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 SOD3P08294 240 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 GATA3P23771 443 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 GPX4P36969 197 aaPredicted RBP6.87□□□□□ -1.31
USP54-203ENST00000418501 ARF6P62330 175 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 RELBQ01201 579 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 BTNL8Q6UX41 500 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 ZNF525Q8N782 197 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 TXNDC17Q9BRA2 123 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 POLEQ07864 2286 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 SLC31A2O15432 143 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 TOX4O94842 621 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 ZNF787Q6DD87 383 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 C5orf24Q7Z6I8 188 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 DCAF16Q9NXF7 216 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 FAM96BQ9Y3D0 163 aa6.87□□□□□ -1.31
USP54-203ENST00000418501 ZNF98A6NK75 572 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 TSPAN4O14817 238 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 APOC3P02656 99 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 SELENOTP62341 195 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 OR1L4Q8NGR5 311 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 DDB2Q92466 427 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 MANBALQ9NQG1 85 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 UNC80Q8N2C7 3258 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 CTXND1A0A1B0GTU2 59 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 RNASEK-C17orf49H0YIS7 233 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 MOSP00540 346 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 FOSL1P15407 271 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 AARDQ4LEZ3 155 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 TPTE2P1Q5T6R2 138 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 OR4C12Q96R67 309 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 ESPL1Q14674 2120 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 OR9G9P0C7N8 305 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 SAA1P0DJI8 122 aaPredicted RBP6.86□□□□□ -1.31
USP54-203ENST00000418501 DEFA4P12838 97 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 RHOBP62745 196 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
USP54-203ENST00000418501 TNXAQ16473 311 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 FFAR4Q5NUL3 377 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 TMEM14BQ9NUH8 114 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 ZNF292O60281 2723 aa6.86□□□□□ -1.31
USP54-203ENST00000418501 ZNF134P52741 427 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 C2orf83Q53S99 150 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 LY6G5BQ8NDX9 201 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 OR11H6Q8NGC7 330 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 UHRF2Q96PU4 802 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 GAR1Q9NY12 217 aaKnown RBP6.85□□□□□ -1.31
USP54-203ENST00000418501 METTL1Q9UBP6 276 aaKnown RBP6.85□□□□□ -1.31
USP54-203ENST00000418501 A0A0G2JRQ6 117 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 P0C879 139 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 REG1BP48304 166 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 GUK1Q16774 197 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 IGHV1-3A0A0C4DH29 117 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 SOHLH1Q5JUK2 328 aa6.85□□□□□ -1.31
USP54-203ENST00000418501 DUX4L9Q6RFH8 374 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms