RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 OR1P1Q8NH06 330 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ARL14EPLP0DKL9 152 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 OPRK1P41145 380 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MRPS11P82912 194 aaKnown RBP9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MS4A5Q9H3V2 200 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SLC25A15Q9Y619 301 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TNFSF13O75888 250 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 NPY1RP25929 384 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ATP5G3P48201 142 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TEPPQ6URK8 271 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 OR52E5Q8NH55 327 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 FAM216AQ8WUB2 273 aa9.7□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ZNF705GA8MUZ8 300 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GLRXP35754 106 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TIMM23BQ5SRD1 257 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TXNDC17Q9BRA2 123 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GNG10P50151 68 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 RHOBP62745 196 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GAMTQ14353 236 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MRPL41Q8IXM3 137 aaKnown RBP9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SLC24A4Q8NFF2 622 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 CORO2AQ92828 525 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 RAB1CQ92928 201 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ACY3Q96HD9 319 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ADTRPQ96IZ2 230 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 UHRF2Q96PU4 802 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 RNF7Q9UBF6 113 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GALR2O43603 387 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 HNF1AP20823 631 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 THBS3P49746 956 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TNFAIP6P98066 277 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 FAM201AQ5SY85 155 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 CISD2Q8N5K1 135 aaKnown RBP9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TMEM18Q96B42 140 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TMEM204Q9BSN7 226 aa9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PHOX2AO14813 284 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GATCO43716 136 aaKnown RBP9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PAX5Q02548 391 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 FAM169BQ8N8A8 192 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TRAV3A0A0B4J244 114 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GFRA3O60609 400 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 HSPE1P61604 102 aaKnown RBP9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 RELBQ01201 579 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 IGFL2Q6UWQ7 119 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 DIRC2Q96SL1 478 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PRO1933Q9H354 126 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PLEKHA3Q9HB20 300 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TRAPPC1Q9Y5R8 145 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 A8MXE2 369 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 F2RL2O00254 374 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ZNF134P52741 427 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 RTL8BQ17RB0 113 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PYGO2Q9BRQ0 406 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PROP1O75360 226 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 CFHR2P36980 270 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PKIAP61925 76 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GNB1P62873 340 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 LCN2P80188 198 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SGMS2Q8NHU3 365 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 KBTBD11-OT1A0A1B0GTJ5 212 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SELLP14151 372 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 NDUFB7P17568 137 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 OR4A47Q6IF82 309 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 TMEM170AQ8WVE7 144 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MGST2Q99735 147 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ASCL3Q9NQ33 180 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 DKK4Q9UBT3 224 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 CACNA1GO43497 2377 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SAA2-SAA4A0A096LPE2 208 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MBD3L4A6NDZ8 208 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MBD3L3A6NE82 208 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MBD3L5A6NJ08 208 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 C15orf61A6NNL5 157 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SLC31A2O15432 143 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SAA2P0DJI9 122 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 VDAC2P45880 294 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 LOXL3P58215 753 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 MBD3L2Q8NHZ7 208 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 LRFN3Q9BTN0 628 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 DERL1Q9BUN8 251 aa9.67□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 GGCTO75223 188 aaKnown RBP9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ACTL6BO94805 426 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 STAG3L2P0CL84 134 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 STAG3L3P0CL85 134 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 CD99P14209 185 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 PRNDQ9UKY0 176 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 OR51B2Q9Y5P1 312 aa9.66□□□□□ -0.86
CSPG4P3Y-201ENST00000418188 DVL1O14640 695 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms