RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SPATA25Q9BR10 227 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TNFRSF19Q9NS68 423 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 SPCS1Q9Y6A9 102 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 MYOFQ9NZM1 2061 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 TRGV10A0A0A0MS01 117 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 BLACEA4D250 179 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 A6NDN8 102 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 SYS1-DBNDD2H3BUS1 97 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 ZNF207O43670 478 aaKnown RBP5.34□□□□□ -1.55
CCNT1-202ENST00000417344 SLC25A17O43808 307 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 RHBDL1O75783 438 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 OR7C1O76099 320 aaPredicted RBP5.34□□□□□ -1.55
CCNT1-202ENST00000417344 AGFG2O95081 481 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 TSPAN13O95857 204 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 IGKV1-39P01597 117 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 IGKV1-5P01602 117 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 APOA2P02652 100 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 IGKV1D-39P04432 117 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 CD1BP29016 333 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 PPOXP50336 477 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 TCL1AP56279 114 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 RPL31P62899 125 aaKnown RBP5.34□□□□□ -1.55
CCNT1-202ENST00000417344 RAB31Q13636 194 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 MSMPQ1L6U9 139 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 PRAMEF5Q5TYX0 476 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 PRAMEF6Q5VXH4 476 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 C2orf91Q6ZV80 131 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 SPACA3Q8IXA5 215 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 VSTM2AQ8TAG5 236 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 BORCS8Q96FH0 119 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 TMEM191AQ9H0A3 160 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 OR2D2Q9H210 308 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 MS4A6AQ9H2W1 248 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 SAP30LQ9HAJ7 183 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 TECRQ9NZ01 308 aaKnown RBP5.34□□□□□ -1.55
CCNT1-202ENST00000417344 COPS7AQ9UBW8 275 aa5.34□□□□□ -1.55
CCNT1-202ENST00000417344 ANKRD30BLA7E2S9 258 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SLC31A1O15431 190 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ADH4P08319 380 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ARL14EPLP0DKL9 152 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 CYBAP13498 195 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 UQCRFS1P47985 274 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 FABP6P51161 128 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 RBM11P57052 281 aaKnown RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF77Q15935 545 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 VWC2Q2TAL6 325 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 GCSAMLQ5JQS6 135 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SLC25A47Q6Q0C1 308 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 FA2HQ7L5A8 372 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 RD3Q7Z3Z2 195 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 BLNKQ8WV28 456 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 BMFQ96LC9 184 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 PMCHL2Q9BQD1 86 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 PLEK2Q9NYT0 353 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 CLCF1Q9UBD9 225 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 C19orf25Q9UFG5 118 aaPredicted RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 PHF3Q92576 2039 aaKnown RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 IGKV1-6A0A0C4DH72 117 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 KIR2DS1A0A191URI9 304 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 A0A1W2PPM0 123 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SMIM27A0A1W2PRY6 76 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 PMS2P5A8MQ11 134 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 J3QR89 54 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 CXorf1O96002 111 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 HBZP02008 142 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 COX8AP10176 69 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 FBLP22087 321 aaKnown RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 CCNOP22674 350 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 DRD3P35462 400 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 KIR2DS4P43632 304 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 KIR2DS1Q14954 304 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 LTC4SQ16873 150 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 DEFB110Q30KQ9 67 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF718Q3SXZ3 478 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 FAM120AOSQ5T036 256 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 CARD17Q5XLA6 110 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SLC35E4Q6ICL7 350 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SLC23A3Q6PIS1 610 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 COLCA1Q6ZS62 124 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SHISA6Q6ZSJ9 500 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 Q6ZSR6 202 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 C11orf52Q96A22 123 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 SPACA9Q96E40 222 aaPredicted RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 NAA38Q9BRA0 125 aaKnown RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 LINC00470Q9BZP3 86 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 RNASE7Q9H1E1 156 aaKnown RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 FGF22Q9HCT0 170 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF331Q9NQX6 463 aaPredicted RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 OSTCQ9NRP0 149 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ALKBH4Q9NXW9 302 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 KCNIP1Q9NZI2 227 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF391Q9UJN7 358 aa5.33□□□□□ -1.56
CCNT1-202ENST00000417344 YTHDF2Q9Y5A9 579 aaKnown RBP5.33□□□□□ -1.56
CCNT1-202ENST00000417344 BRCA2P51587 3418 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 A0A0J9YY10 115 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 IZUMO1RA6ND01 250 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 PRR33A8MZF0 331 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms