RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 FYTTD1Q96QD9 318 aaKnown RBP10.9□□□□□ -0.67
PAF1-202ENST00000416728 TECRQ9NZ01 308 aaKnown RBP10.9□□□□□ -0.67
PAF1-202ENST00000416728 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.67
PAF1-202ENST00000416728 SPATA2Q9UM82 520 aa10.9□□□□□ -0.67
PAF1-202ENST00000416728 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 NPIPB5A8MRT5 1133 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 NOTOA8MTQ0 251 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 OR11H12B2RN74 326 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 LGALS9O00182 355 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 SCGNO76038 276 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 JTBO76095 146 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 OR2C1O95371 312 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 KIR2DS2P43631 304 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 TMEM167AQ8TBQ9 72 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 WFDC10AQ9H1F0 79 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 ZC4H2Q9NQZ6 224 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 SLC2A9Q9NRM0 540 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 TAS2R8Q9NYW2 309 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
PAF1-202ENST00000416728 RBMY1BA6NDE4 496 aaKnown RBP10.88□□□□□ -0.67
PAF1-202ENST00000416728 RBMY1EA6NEQ0 496 aaKnown RBP10.88□□□□□ -0.67
PAF1-202ENST00000416728 DHFRP00374 187 aa10.88□□□□□ -0.67
PAF1-202ENST00000416728 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
PAF1-202ENST00000416728 IL6RP08887 468 aaPredicted RBP10.88□□□□□ -0.67
PAF1-202ENST00000416728 RBMY1DP0C7P1 496 aaKnown RBP10.88□□□□□ -0.67
PAF1-202ENST00000416728 EDN2P20800 178 aa10.88□□□□□ -0.67
PAF1-202ENST00000416728 MAS1LP35410 378 aa10.88□□□□□ -0.67
PAF1-202ENST00000416728 PUSL1Q8N0Z8 303 aaKnown RBP10.88□□□□□ -0.67
PAF1-202ENST00000416728 ANXA10Q9UJ72 324 aa10.88□□□□□ -0.67
PAF1-202ENST00000416728 E7EUB6 86 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 NDUFB8O95169 186 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 HRASP01112 189 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 ZNF735P0CB33 412 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 AREGP15514 252 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 FGF9P31371 208 aaPredicted RBP10.87□□□□□ -0.67
PAF1-202ENST00000416728 ARL3P36405 182 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 EIF4EBP1Q13541 118 aaPredicted RBP10.87□□□□□ -0.67
PAF1-202ENST00000416728 CLEC19AQ6UXS0 136 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 ZNF66Q6ZN08 573 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 SLC16A13Q7RTY0 426 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 GPHB5Q86YW7 130 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 MFSD4AQ8N468 514 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 EEF1AKMT3Q96AZ1 226 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 WDR89Q96FK6 387 aaPredicted RBP10.87□□□□□ -0.67
PAF1-202ENST00000416728 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 TXNL4BQ9NX01 149 aaKnown RBP10.87□□□□□ -0.67
PAF1-202ENST00000416728 DAPK2Q9UIK4 370 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 S4R3C0 116 aa10.87□□□□□ -0.67
PAF1-202ENST00000416728 A0A1B0GW64 132 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 ZNF320A2RRD8 509 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 SSX5O60225 188 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 MRPS14O60783 128 aaKnown RBP10.86□□□□□ -0.67
PAF1-202ENST00000416728 CRYGCP07315 174 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 CBLN1P23435 193 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 PSMB9P28065 219 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 PSMB6P28072 239 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 BRWD1-AS2P59051 145 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 GABARAPL2P60520 117 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 RPL8P62917 257 aaKnown RBP10.86□□□□□ -0.67
PAF1-202ENST00000416728 FAM106AQ4KMX7 169 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 UBE2UQ5VVX9 321 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 TPRA1Q86W33 373 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 LGALS14Q8TCE9 139 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 CACNG8Q8WXS5 425 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 GPHA2Q96T91 129 aa10.86□□□□□ -0.67
PAF1-202ENST00000416728 RRP15Q9Y3B9 282 aaKnown RBP10.86□□□□□ -0.67
PAF1-202ENST00000416728 DEFA4P12838 97 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 HIST1H1BP16401 226 aaKnown RBP10.85□□□□□ -0.67
PAF1-202ENST00000416728 CTRB1P17538 263 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 HLA-GP17693 338 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 ARPC4P59998 168 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 ZNF57Q68EA5 555 aaPredicted RBP10.85□□□□□ -0.67
PAF1-202ENST00000416728 CTRB2Q6GPI1 263 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 OR4A47Q6IF82 309 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 SFXN4Q6P4A7 337 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 SECTM1Q8WVN6 248 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 AIFM2Q9BRQ8 373 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 RHBDL2Q9NX52 303 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 RAB26Q9ULW5 256 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 SELENOKQ9Y6D0 94 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 CSMD3Q7Z407 3707 aa10.85□□□□□ -0.67
PAF1-202ENST00000416728 TMEM213A2RRL7 107 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 A8MWP6 167 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 TNFSF12O43508 249 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 REG1AP05451 166 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 MSMO1Q15800 293 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 TIMM50Q3ZCQ8 353 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 SPAG16Q8N0X2 631 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 UXS1Q8NBZ7 420 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 BEST4Q8NFU0 473 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 OR52B4Q8NGK2 314 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 OR13F1Q8NGS4 319 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 OR4A5Q8NH83 315 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 CXorf58Q96LI9 332 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms