RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 HPRT1P00492 218 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 CD55P08174 381 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 FHL1Q13642 323 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 DOLPP1Q86YN1 238 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
SCN1B-202ENST00000415950 WNT10AQ9GZT5 417 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 ARHGAP21Q5T5U3 1957 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 SNAI2O43623 268 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 RND2P52198 227 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 DCAF10Q5QP82 559 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 OR8G5Q8NG78 346 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 OR4B1Q8NGF8 309 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 ZNF524Q96C55 264 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 KLK15Q9H2R5 256 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 MPV17P39210 176 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 TWIST1Q15672 202 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 C14orf144Q96I85 54 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 CYYR1Q96J86 154 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 NOTCH2Q04721 2471 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 SLC17A3O00476 420 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 RRHO14718 337 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 RFPL3SP0C7P2 107 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 SLC25A53Q5H9E4 307 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 RNFT1Q5M7Z0 435 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 KCNS1Q96KK3 526 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 QTRT1Q9BXR0 403 aaKnown RBP10.99□□□□□ -0.65
SCN1B-202ENST00000415950 ZFP30Q9Y2G7 519 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 S1PR2O95136 353 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 CD3EP07766 207 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 CKS2P33552 79 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 SRP14P37108 136 aaKnown RBP10.99□□□□□ -0.65
SCN1B-202ENST00000415950 ERVFRD-1P60508 538 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 TRIP6Q15654 476 aaKnown RBP10.99□□□□□ -0.65
SCN1B-202ENST00000415950 TRPM7Q96QT4 1865 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 MT-ND6P03923 174 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 HERVK_113P61574 105 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 LRRC75BQ2VPJ9 315 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 FOXJ2Q9P0K8 574 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 NOTCH4Q99466 2003 aa10.99□□□□□ -0.65
SCN1B-202ENST00000415950 SIP14410 1827 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 KBTBD11O94819 623 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 CD5P06127 495 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 MMD2Q8IY49 270 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 AUP1Q9Y679 476 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 PRSS2P07478 247 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 KIR2DL2P43627 348 aaPredicted RBP10.98□□□□□ -0.65
SCN1B-202ENST00000415950 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
SCN1B-202ENST00000415950 TFPI2P48307 235 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 TNFRSF9Q07011 255 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 CSRP2Q16527 193 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 C2orf83Q53S99 150 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 DMRTA1Q5VZB9 504 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 WNT5BQ9H1J7 359 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 VSIRQ9H7M9 311 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 TSC2P49815 1807 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 MARCH11A6NNE9 402 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 F2RL2O00254 374 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 EFNA2O43921 213 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 NPIPB7O75200 414 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 HLA-DQA1P01909 254 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 UCP2P55851 309 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 ST6GALNAC6Q969X2 333 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 SLC25A10Q9UBX3 287 aaPredicted RBP10.98□□□□□ -0.65
SCN1B-202ENST00000415950 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 AMMECR1Q9Y4X0 333 aaPredicted RBP10.98□□□□□ -0.65
SCN1B-202ENST00000415950 SELENOKQ9Y6D0 94 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 A0A0C4DFX4 3053 aa10.98□□□□□ -0.65
SCN1B-202ENST00000415950 A0A1W2PQM1 296 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 UBE2CO00762 179 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 MGST3O14880 152 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 REG1AP05451 166 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 SLC25A34Q6PIV7 304 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 TCF23Q7RTU1 214 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 LYZL4Q96KX0 146 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 HS3ST3B1Q9Y662 390 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 K7N7A8 449 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 SLC25A17O43808 307 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 PRR31Q5SQ13 230 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 C1orf210Q8IVY1 113 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 OR8B2Q96RD0 313 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 TTTY12Q9BZ98 90 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 PRRC2CQ9Y520 2896 aaKnown RBP10.97□□□□□ -0.65
SCN1B-202ENST00000415950 IGKV3D-15A0A087WSY6 115 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 IGKV3-15P01624 115 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 INO80CQ6PI98 192 aaPredicted RBP10.97□□□□□ -0.65
SCN1B-202ENST00000415950 SRSF12Q8WXF0 261 aaKnown RBP10.97□□□□□ -0.65
SCN1B-202ENST00000415950 TFF1P04155 84 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 MAS1LP35410 378 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 P2RY6Q15077 328 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 GATAD1Q8WUU5 269 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 ITLN1Q8WWA0 313 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 GALNT14Q96FL9 552 aa10.97□□□□□ -0.65
SCN1B-202ENST00000415950 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 C1QTNF9BB2RNN3 333 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 FABP2P12104 132 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms