RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FKBP11Q9NYL4 201 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 PTPRBP23467 1997 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 TRAV9-1A0A075B6T8 112 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 TIMM8AO60220 97 aaPredicted RBP8.12□□□□□ -1.11
CD44-206ENST00000415148 IGHG3P01860 377 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 HOXC12P31275 282 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 SSTR5P35346 364 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 VDAC2P45880 294 aaPredicted RBP8.12□□□□□ -1.11
CD44-206ENST00000415148 THBS3P49746 956 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 HCFC1P51610 2035 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 ARG2P78540 354 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 TRIP6Q15654 476 aaKnown RBP8.12□□□□□ -1.11
CD44-206ENST00000415148 IQCJQ1A5X6 159 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 MORN2Q502X0 79 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 CXorf67Q86X51 503 aaPredicted RBP8.12□□□□□ -1.11
CD44-206ENST00000415148 ARRDC1-AS1Q9H2J1 176 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 RNF114Q9Y508 228 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 PRSS46E5RG02 174 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 ITGB1BP1O14713 200 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 PRDX2P32119 198 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 ADMP35318 185 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 TDGF1P3P51864 188 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 LPAL2Q16609 132 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 PPP1R35Q8TAP8 253 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 SDSLQ96GA7 329 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 SFRP2Q96HF1 295 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 PATZ1Q9HBE1 687 aaKnown RBP8.12□□□□□ -1.11
CD44-206ENST00000415148 TRAPPC1Q9Y5R8 145 aa8.12□□□□□ -1.11
CD44-206ENST00000415148 IGHV3-43A0A0B4J1X8 118 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 TRGV8A0A0C4DH27 118 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 RRHO14718 337 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 FCGR3BO75015 233 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 PROP1O75360 226 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 IGHV3-43DP0DP04 118 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 CD59P13987 128 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 CFHR2P36980 270 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
CD44-206ENST00000415148 EDDM3BP56851 147 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 YPEL3P61236 119 aaPredicted RBP8.11□□□□□ -1.11
CD44-206ENST00000415148 ERVK-16P61578 105 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 PRAMEF5Q5TYX0 476 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 PRAMEF6Q5VXH4 476 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 Q6ZWC4 215 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 CD177Q8N6Q3 437 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 PLPPR2Q96GM1 343 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 NCOR1P1Q9H4R4 102 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 NPVFQ9HCQ7 196 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 HEYLQ9NQ87 328 aaPredicted RBP8.11□□□□□ -1.11
CD44-206ENST00000415148 LY96Q9Y6Y9 160 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 MDFIC2A0A1B0GVS7 189 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 DEFB108AA8MXU0 73 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 IGLV1-44P01699 117 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 CDKN1AP38936 164 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 ERVFC1-1P60608 527 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 RFESDQ8TAC1 157 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 LOXL4Q96JB6 756 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 TBX15Q96SF7 602 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 ELOVL5Q9NYP7 299 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 NAGKQ9UJ70 344 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 METRNQ9UJH8 293 aa8.11□□□□□ -1.11
CD44-206ENST00000415148 KIR2DL5BA0A0G2JN68 375 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 KIR2DL5BA0A0G2JPC4 375 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 LNP1A1A4G5 178 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 F2RL2O00254 374 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 MGST3O14880 152 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 GFRA3O60609 400 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 MT-CO2P00403 227 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 ZNF25P17030 456 aaPredicted RBP8.1□□□□□ -1.11
CD44-206ENST00000415148 RAB4AP20338 218 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 TNFSF10P50591 281 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 RELBQ01201 579 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 HLA-DRB5Q30154 266 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 KIR2DL5AQ8N109 375 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 FAM169BQ8N8A8 192 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 SGMS2Q8NHU3 365 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 LRRC29Q8WV35 223 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 TMEM68Q96MH6 324 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 TRIB1Q96RU8 372 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 S1PR3Q99500 378 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 MGST2Q99735 147 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 DCTN5Q9BTE1 182 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 GGTLC1Q9BX51 225 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 RAB9BQ9NP90 201 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 LSM4Q9Y4Z0 139 aaKnown RBP8.1□□□□□ -1.11
CD44-206ENST00000415148 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 ZNF705FA8MVS1 300 aaPredicted RBP8.1□□□□□ -1.11
CD44-206ENST00000415148 FNDC10F2Z333 226 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 AGFG2O95081 481 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 ZNF705DP0CH99 300 aaPredicted RBP8.1□□□□□ -1.11
CD44-206ENST00000415148 ZNF705BP0CI00 300 aaPredicted RBP8.1□□□□□ -1.11
CD44-206ENST00000415148 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 CBLN1P23435 193 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 KIR2DL2P43627 348 aaPredicted RBP8.1□□□□□ -1.11
CD44-206ENST00000415148 MS4A10Q96PG2 267 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 MS4A5Q9H3V2 200 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 PLSCR4Q9NRQ2 329 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms