RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OBSL1O75147 1896 aa10.06□□□□□ -0.8
PTPRF-205ENST00000414879 IGHV1-46P01743 117 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 TSPOP30536 169 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 WNT5AP41221 380 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 BATFQ16520 125 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 C4orf17Q53FE4 359 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 TLNRD1Q9H1K6 362 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 MYLKQ15746 1914 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 Q6ZS49 121 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 TEX45Q8NA69 505 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
PTPRF-205ENST00000414879 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 PARD6AQ9NPB6 346 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 PNRC2Q9NPJ4 139 aaKnown RBP10.05□□□□□ -0.8
PTPRF-205ENST00000414879 KIAA1324LA8MWY0 1029 aaPredicted RBP10.05□□□□□ -0.8
PTPRF-205ENST00000414879 TMEM250H0YL14 139 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 H0YL77 283 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 SIGIRRQ6IA17 410 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 CDC42EP3Q9UKI2 254 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 AUP1Q9Y679 476 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 CXorf65A6NEN9 183 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 F5H697 171 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 KLK2P20151 261 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 NPPCP23582 126 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 HCP5Q6MZN7 132 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 FAM24BQ8N5W8 94 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 EIF4E3Q8N5X7 224 aaKnown RBP10.05□□□□□ -0.8
PTPRF-205ENST00000414879 MARVELD3Q96A59 401 aa10.05□□□□□ -0.8
PTPRF-205ENST00000414879 PRR32B1ATL7 298 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 FAM3BP58499 235 aaPredicted RBP10.04□□□□□ -0.8
PTPRF-205ENST00000414879 CD81P60033 236 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 OR4A47Q6IF82 309 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 LDLRAD4O15165 306 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 MORN2Q502X0 79 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 PLPPR1Q8TBJ4 325 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 TMEM37Q8WXS4 190 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 OR51M1Q9H341 326 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 ARID1AO14497 2285 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 TRAV24A0A0B4J272 114 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 FOXF2Q12947 444 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 ZNF705AQ6ZN79 300 aaPredicted RBP10.04□□□□□ -0.8
PTPRF-205ENST00000414879 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 ZNF319Q9P2F9 582 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 CRISP2P16562 243 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 GCSHP23434 173 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 CD300CQ08708 224 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 RSG1Q9BU20 258 aa10.04□□□□□ -0.8
PTPRF-205ENST00000414879 GBF1Q92538 1859 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 IGKV3-15P01624 115 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 PAQR4Q8N4S7 273 aaPredicted RBP10.03□□□□□ -0.8
PTPRF-205ENST00000414879 C2CD4CQ8TF44 421 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 RAB24Q969Q5 203 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 MESP1Q9BRJ9 268 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 ASXL3Q9C0F0 2248 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 RUNX1Q01196 453 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 GAMTQ14353 236 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 MINOS1Q5TGZ0 78 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 ZNF418Q8TF45 676 aaPredicted RBP10.03□□□□□ -0.8
PTPRF-205ENST00000414879 MINOS1-NBL1R4GNA1 71 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 LOC102723971A0A1B0GUV8 181 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 ZNF250P15622 560 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 RPL39P5Q59GN2 51 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 SAPCD1Q5SSQ6 148 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 CYP2G1PQ6ZSU1 146 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 LDLRAD3Q86YD5 345 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 SYT8Q8NBV8 401 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 GPR82Q96P67 336 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 NABP2Q9BQ15 211 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 UPK2O00526 184 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 ASCL4Q6XD76 172 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 NCOR1P1Q9H4R4 102 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 NAGKQ9UJ70 344 aa10.03□□□□□ -0.8
PTPRF-205ENST00000414879 TEX50A0A1B0GTY4 177 aa10.02□□□□□ -0.8
PTPRF-205ENST00000414879 AMTP48728 403 aa10.02□□□□□ -0.8
PTPRF-205ENST00000414879 DLX6P56179 175 aa10.02□□□□□ -0.8
PTPRF-205ENST00000414879 TMEM177Q53S58 311 aa10.02□□□□□ -0.8
PTPRF-205ENST00000414879 FAM71F2Q6NXP2 309 aa10.02□□□□□ -0.8
PTPRF-205ENST00000414879 HEPN1Q6WQI6 88 aa10.02□□□□□ -0.8
PTPRF-205ENST00000414879 RPUSD1Q9UJJ7 312 aaKnown RBP10.02□□□□□ -0.8
PTPRF-205ENST00000414879 AP4M1O00189 453 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 SLC31A2O15432 143 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 NBR2O15453 112 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 NR2C2APQ86WQ0 139 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 FGFBP3Q8TAT2 258 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 LINC00052Q96N35 136 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 IL36RNQ9UBH0 155 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 A0A0G2JNJ9 132 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 H0Y8G0 127 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 VENTXO95231 258 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 CA2P00918 260 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 CLEC12BQ2HXU8 276 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 SDK2Q58EX2 2172 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 ARPC1AQ92747 370 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 C18orf12Q96KH6 178 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms