RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZNF134P52741 427 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 ZNF674Q2M3X9 581 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 MORN2Q502X0 79 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 FAM219AQ8IW50 185 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 HIST3H2BBQ8N257 126 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 MAPK1IP1LQ8NDC0 245 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 NINJ1Q92982 152 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 NEU1Q99519 415 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 RTBDNQ9BSG5 229 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-202ENST00000414700 GAL3ST2Q9H3Q3 398 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 IDI2-AS1Q9NZ38 188 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 STRAPQ9Y3F4 350 aaKnown RBP12.71□□□□□ -0.38
SHMT2-202ENST00000414700 OR2W1Q9Y3N9 320 aa12.71□□□□□ -0.38
SHMT2-202ENST00000414700 A0A096LNT2 108 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 DIRAS3O95661 229 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 PAX2Q02962 417 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 RELQ04864 619 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-202ENST00000414700 CLEC9AQ6UXN8 241 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 LFNGQ8NES3 379 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 GPHA2Q96T91 129 aa12.7□□□□□ -0.38
SHMT2-202ENST00000414700 HERV-K104P61576 105 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 ARF6P62330 175 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 SPNS3Q6ZMD2 512 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 FOXRED2Q8IWF2 684 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 SMIM3Q9BZL3 60 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 SMDT1Q9H4I9 107 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 ONECUT1Q9UBC0 465 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 RNF150Q9ULK6 438 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 DEDDO75618 318 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 LIPFP07098 398 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 OR13C7P0DN81 318 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 GNRHRP30968 328 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 KHDC3LQ587J8 217 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 PLEKHA2Q9HB19 425 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 FBXO7Q9Y3I1 522 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
SHMT2-202ENST00000414700 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 A0A087WWC5 75 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 BORCS7-ASMTA0A0B4J1R7 106 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 C17orf98A8MV24 154 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BKO60814 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 IGLV2-14P01704 120 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BJP06899 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 IGHV1-8P0DP01 117 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 SLC25A16P16260 332 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BOP23527 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BBP33778 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 GNG10P50151 68 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BDP58876 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BCP62807 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST2H2BEQ16778 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 IAH1Q2TAA2 248 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-202ENST00000414700 ZNF818PQ6ZRF7 136 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 Q8N7P7 452 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 OR13D1Q8NGV5 346 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BHQ93079 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 Q96MF0 132 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BNQ99877 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 HIST1H2BMQ99879 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 PRO1933Q9H354 126 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
SHMT2-202ENST00000414700 ABCA1O95477 2261 aa12.68□□□□□ -0.38
SHMT2-202ENST00000414700 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 TCAPO15273 167 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 YPEL1O60688 119 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 PHLDA2Q53GA4 152 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 ABHD14BQ96IU4 210 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 GPR61Q9BZJ8 451 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 UNKLQ9H9P5 680 aaKnown RBP12.67□□□□□ -0.38
SHMT2-202ENST00000414700 PSG11Q9UQ72 335 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 RBM7Q9Y580 266 aaKnown RBP12.67□□□□□ -0.38
SHMT2-202ENST00000414700 OTOGQ6ZRI0 2925 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 SETXQ7Z333 2677 aaKnown RBP12.67□□□□□ -0.38
SHMT2-202ENST00000414700 ACANP16112 2415 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 HSD17B6O14756 317 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 ELOBQ15370 118 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 CT45A1Q5HYN5 189 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 WFDC11Q8NEX6 87 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 CT45A3Q8NHU0 189 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 Q8WTZ3 238 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 MISP3Q96FF7 219 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 C5orf30Q96GV9 206 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 SUCNR1Q9BXA5 334 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 OR2D2Q9H210 308 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
SHMT2-202ENST00000414700 IGHV2-70DA0A0C4DH43 119 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 ZNF439Q8NDP4 499 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 OR52M1Q8NGK5 317 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms