RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RPL39P5Q59GN2 51 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 CDC42EP3Q9UKI2 254 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 ZNF318Q5VUA4 2279 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 IGFBP3P17936 291 aaPredicted RBP14.59□□□□□ -0.07
PHRF1-202ENST00000413872 IER3P46695 156 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 PINLYPA6NC86 204 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 SCGB1C2P0DMR2 95 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 THADAQ6YHU6 1953 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 ACACAQ13085 2346 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 IGHV3OR16-10A0A075B7F0 116 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 NPIPB6E9PJ23 425 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 DSCR9P59020 149 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 ZNF880Q6PDB4 577 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 NPIPB3Q92617 1050 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 PLSCR4Q9NRQ2 329 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 PLAUP00749 431 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 AREGP15514 252 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 UCP1P25874 307 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 SNRPEP62304 92 aaKnown RBP14.59□□□□□ -0.07
PHRF1-202ENST00000413872 VAMP3Q15836 100 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 EAF1Q96JC9 268 aaPredicted RBP14.59□□□□□ -0.07
PHRF1-202ENST00000413872 PSMG3Q9BT73 122 aaPredicted RBP14.59□□□□□ -0.07
PHRF1-202ENST00000413872 M0QZK8 103 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 NDUFB4O95168 129 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 MFAP2P55001 183 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 RAB24Q969Q5 203 aa14.59□□□□□ -0.07
PHRF1-202ENST00000413872 MOSP00540 346 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 THBDP07204 575 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 LY6DQ14210 128 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 SGMS2Q8NHU3 365 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 GPHA2Q96T91 129 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 A0A0G2JK05 382 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 IBA57Q5T440 356 aaKnown RBP14.58□□□□□ -0.08
PHRF1-202ENST00000413872 OR4X2Q8NGF9 303 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 FAM3BP58499 235 aaPredicted RBP14.58□□□□□ -0.08
PHRF1-202ENST00000413872 FAM201AQ5SY85 155 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 CYB561D1Q8N8Q1 229 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 DUX5Q96PT3 197 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 TP53RKQ96S44 253 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 GCSHP23434 173 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 SIGIRRQ6IA17 410 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 SPSB4Q96A44 273 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 NABP2Q9BQ15 211 aa14.58□□□□□ -0.08
PHRF1-202ENST00000413872 NCOR1O75376 2440 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 NYNRINQ9P2P1 1898 aaKnown RBP14.57□□□□□ -0.08
PHRF1-202ENST00000413872 H0YL77 283 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 REG1AP05451 166 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 UNQ6494/PRO21346Q6UXR6 183 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 VKORC1L1Q8N0U8 176 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 NUP37Q8NFH4 326 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 OR4B1Q8NGF8 309 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 IGKV1D-33P01593 117 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 IGKV1-33P01594 117 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.57□□□□□ -0.08
PHRF1-202ENST00000413872 IGHV1-18A0A0C4DH31 117 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 CDKN1AP38936 164 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 RELBQ01201 579 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 SDK2Q58EX2 2172 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 TWIST1Q15672 202 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 ZNF343Q6P1L6 599 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 FBXL15Q9H469 300 aa14.57□□□□□ -0.08
PHRF1-202ENST00000413872 YPEL1O60688 119 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 DLX6P56179 175 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 ISOC2Q96AB3 205 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 YPEL2Q96QA6 119 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 RTN4RQ9BZR6 473 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 FUT9Q9Y231 359 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 IL4P05112 153 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 ZNF250P15622 560 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 BMPERQ8N8U9 685 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 SIAH2O43255 324 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 PPP1R27Q86WC6 154 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 IFI27L2Q9H2X8 130 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 NEUROG3Q9Y4Z2 214 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 DOCK4Q8N1I0 1966 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 CA2P00918 260 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 ZNF660Q6AZW8 331 aaPredicted RBP14.56□□□□□ -0.08
PHRF1-202ENST00000413872 GGNQ86UU5 652 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 MSRB2Q9Y3D2 182 aa14.56□□□□□ -0.08
PHRF1-202ENST00000413872 NPFFR1Q9GZQ6 430 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 DHRS11Q6UWP2 260 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 WDR82Q6UXN9 313 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 ARPC1AQ92747 370 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 RTTNQ86VV8 2226 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 OR4A47Q6IF82 309 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 TMEM8BA6NDV4 472 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 M0R143 59 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 SAMD13Q5VXD3 122 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 CYP2G1PQ6ZSU1 146 aa14.55□□□□□ -0.08
PHRF1-202ENST00000413872 NUTF2P61970 127 aaKnown RBP14.54□□□□□ -0.08
PHRF1-202ENST00000413872 MDS2Q8NDY4 140 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 CACNG8Q8WXS5 425 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 YAE1D1Q9NRH1 226 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 RALGAPA1Q6GYQ0 2036 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 CD8AP01732 235 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 CA7P43166 264 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 SAPCD1Q5SSQ6 148 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 FAM209BQ5JX69 171 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 ZNF362Q5T0B9 420 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms